PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009798831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | EIL | ||||||||
Protein Properties | Length: 603aa MW: 68420.3 Da PI: 6.5162 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 504.3 | 6e-154 | 50 | 427 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++rmw+d+m+lkrlke++k+ ke ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv gasd+Lr+WW XP_009798831.1 50 DELERRMWRDKMKLKRLKEMTKS----KEG-VDPAKHRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVGGASDNLREWW 139 79******************998....677.9999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 k+kv+fdrngpaai+kyqa+++i++ +++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww++lgl+k+q XP_009798831.1 140 KDKVRFDRNGPAAIAKYQADHAIPGMNEGSNP-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGQEDWWPQLGLQKEQ 233 ******************************87.99************************************************************ PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqke 282 g+ppykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l++++qee+++++++++ + s+ s ++l++++++ XP_009798831.1 234 GPPPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIISQEEALARELYPDrcPAlSSAGASGTFILDDSSEY 328 *************************************************************************7533566679************ PP XXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXX CS EIN3 283 dvegkkeskikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkn 347 dveg +++ +v+++k ++ +++++rkrk + e + ++++++ +tc+ +q+++se +++f+ k+ XP_009798831.1 329 DVEGAQDEPNFDVHEQKPNHlsllnigverfketlplqqqshpnkdefitNLDFTRKRK-QANELTVMMDQKI-YTCEFQQCPHSELRNGFQGKS 421 ***77777779999999999**************************************9.6777777777765.********************* PP XXXXXX CS EIN3 348 sisqne 353 ++++++ XP_009798831.1 422 ARDNHQ 427 ****98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.5E-129 | 50 | 297 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.1E-75 | 171 | 307 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.22E-61 | 176 | 300 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 603 aa Download sequence Send to blast |
MMMFEEMGFC GDLDFFPAPL KEVEVAAPHT EPKPELVVDD DYSDEEIDMD ELERRMWRDK 60 MKLKRLKEMT KSKEGVDPAK HRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKAQGFVYGI 120 IPEKGKPVGG ASDNLREWWK DKVRFDRNGP AAIAKYQADH AIPGMNEGSN PVGPTPHTLQ 180 ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VSPPWWPTGQ EDWWPQLGLQ KEQGPPPYKK 240 PHDLKKAWKV GVLTAVIKHM FPDIAKIRKL VRQSKCLQDK MTAKESATWL AIISQEEALA 300 RELYPDRCPA LSSAGASGTF ILDDSSEYDV EGAQDEPNFD VHEQKPNHLS LLNIGVERFK 360 ETLPLQQQSH PNKDEFITNL DFTRKRKQAN ELTVMMDQKI YTCEFQQCPH SELRNGFQGK 420 SARDNHQFAC PFRNSSQFGV SNFNFNEVKP VVFPQQYVQP KSASLPVNQG PPTFDLSGVG 480 VPEDGQRMIT ELMSFYDSNI QGNKSQNTGN VALTKEQPHQ QPRVNQDNYL HSQGIMEGNI 540 FKDANISTSH SMLPQASPFN AGPNDNFHFM FGSPFNLQSA NYTGNLPGIG YDTTPKQNLP 600 TWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-84 | 175 | 306 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-84 | 175 | 306 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 382 | 387 | TRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY248906 | 0.0 | AY248906.1 Nicotiana tabacum EIL4 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009798829.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Refseq | XP_009798831.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A1U7YHV1 | 0.0 | A0A1U7YHV1_NICSY; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | XP_009798829.1 | 0.0 | (Nicotiana sylvestris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |