PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009798779.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 445aa    MW: 50304 Da    PI: 4.6687
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009798779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.82.1e-23141473128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      GfrF+Ptdeel+ +yL k v+ k++++ ++i+  d+y   +Pwd+  +++ ++++++ yfF+k ++++a g+r +r  +  g Wk   k+k+v+
  XP_009798779.1  14 LGFRFRPTDEELI-RYLLKFVSCKSFSF-DHIRVEDLYGNkKPWDIFeNNFLGDDTKVnYFFTKLKRTKAGGSRFSRgLIGGGCWKGLDKHKPVF 106
                     6************.9***********99.88*****996549****6455555555545******************999*************** PP

             NAM  94 skkgelvglkktLvfy......kgrapkge.....ktdWvmheyrl 128
                     + +++lvg kk++ +       +++    +     +  W m+ey+l
  XP_009798779.1 107 N-GSKLVGFKKSFRYLekdsrtEKS----VdqgikNIVWNMKEYSL 147
                     *.9*************443332222....123333668******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-2512174IPR003441NAC domain
PROSITE profilePS5100525.91612174IPR003441NAC domain
PfamPF023651.7E-1315147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MTISSNNYGP YPVLGFRFRP TDEELIRYLL KFVSCKSFSF DHIRVEDLYG NKKPWDIFEN  60
NFLGDDTKVN YFFTKLKRTK AGGSRFSRGL IGGGCWKGLD KHKPVFNGSK LVGFKKSFRY  120
LEKDSRTEKS VDQGIKNIVW NMKEYSLNDN TVKVLRQRNI IQHEAYVLCC IKRKSVHAND  180
HKELGDHMEI ADSGNNVVAV MNTMLSTTQE HDYVTNSSED QGTGVHDLCP SNQFSSSEHN  240
NAFDQLQLVD VQAQNIEELA PSVQSHVESV GSSSTTSNQF TYYSPDNNGF QLQQYHSNIE  300
CDDRATVPST LAEIMNNIDH VDMKVYEYLG SLLAVKSNTA EPQLPICIDE QNIMCQMAQG  360
SSTSMVNEEN IDAGFVSDQW SIKQVHNIEE RAPITFTDML TSSDYYAEPC LVISSDECFT  420
MEELLGSDDD DVIAADLGWM PTQTQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798779.10.0PREDICTED: putative NAC domain-containing protein 94
TrEMBLA0A1U7YHQ50.0A0A1U7YHQ5_NICSY; putative NAC domain-containing protein 94
STRINGXP_009798779.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-23NAC domain containing protein 2