PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009798380.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 501aa    MW: 56219 Da    PI: 6.8315
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009798380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.6e-11210249541
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                     k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  XP_009798380.1 210 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 249
                     7789***********************9633356666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-8201254No hitNo description
SMARTSM003384.4E-7206277IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.933208252IPR004827Basic-leucine zipper domain
CDDcd147081.12E-21210262No hitNo description
PfamPF001706.0E-8210249IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.87E-7210247No hitNo description
PROSITE patternPS000360213228IPR004827Basic-leucine zipper domain
PfamPF141442.7E-30301375IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MGFQGSYSTE EENKLFIGVH FMASSNKSND DLLLNNNSQI SFGSSQQQFF HSPQQQHDQH  60
QLQNNSNQIS FGLFQQHSSS SSNPGNFINK DNSGAYDLGE LDQALFLYLD GQEPSSIQDQ  120
RHNSGVRPPT LNIFPSQPMH IEPSSTKANN GLVSQATSGS NKSSQPSMAK TDIVPSASGL  180
EPPKTAKREG IRKGPTSSSE QDAPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLESSR  240
IRLAQLEQEI QRARSQGFYV GGNALQAGEQ ALAVNMANIS SDAAIFDLEY ARWLEEHHRL  300
MCELRNAVQE HLQENELRIY VENCITHYDE IMNLKCMLAK SDVFHLVSGL WKTPAERCFL  360
WMGDFRPSEL LKIILSQIEP LTENQLMGIC GLQQSTQEAE DALSQGLESL NQSLSDTIAS  420
DALACPQNMA NYMGQMALAM NKLSTVEGFL RQADNLRHQT IHRLHQILTT RQAARCFLAI  480
GEYFHRLRAL SSLWLARPRQ E
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009798380.10.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_016463456.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S3ZGP20.0A0A1S3ZGP2_TOBAC; transcription factor HBP-1b(C38)-like
TrEMBLA0A1U7YHS60.0A0A1U7YHS6_NICSY; transcription factor HBP-1b(C38)-like
STRINGXP_009798380.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-179bZIP family protein