PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009798218.1

Organism

Nicotiana sylvestris

Taxonomic ID

4096

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 431aa MW: 47268.4 Da PI: 5.1558

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009798218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.1	1.8e-08	90	152	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e +r r NRe+Ar +R++a eeL++k++ L +eNk Lkk+ + ke+++lk+e+ XP_009798218.1 90 EREERRLCRVLANRESARQTIRRRQAMYEELTTKAADLASENKNLKKTKKLAAKEYESLKNEN 152 678889999999*************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.6E-4	86	150	No hit	No description
Pfam	PF00170	8.2E-7	90	152	IPR004827	Basic-leucine zipper domain
SMART	SM00338	9.9E-7	90	154	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.496	92	155	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.9E-5	94	150	No hit	No description
CDD	cd14702	1.36E-8	95	130	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence Send to blast
MNINTKQVEE STPPCTAEEG RVSGGDGEDE VVEYELEAAQ ALACLAGRSK EQAIAMPPEQ 60 ESELETIPRD ALNYLPIASR RSRQNLTEDE REERRLCRVL ANRESARQTI RRRQAMYEEL 120 TTKAADLASE NKNLKKTKKL AAKEYESLKN ENTNLRIQVA KLEKAEVEET DGGSKSKPVE 180 ISATNTAATP NPTPNPIPVP LVNQSPITPF FWPSIVQPFN GILLQCGSQN ISDITSVLPL 240 PASAELNPIN RQESSNPGNP IFVLPVPCLI PFHPQSSSPF LPWSSTLTDK HFAETSSIHQ 300 CSNSYLNTEN NQAAIAAETD APESVKATQR DFFHEAELRF PPEGGASEGS RQPSSSHIQL 360 GTSEHINAPD IGAVSCTVGH VEDTSEKTSQ ECSTSSSKNP VDPHAAAEAR KRRKELLKLR 420 SQHSDQFGPH H

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence Send to blast

MNINTKQVEE STPPCTAEEG RVSGGDGEDE VVEYELEAAQ ALACLAGRSK EQAIAMPPEQ  60
ESELETIPRD ALNYLPIASR RSRQNLTEDE REERRLCRVL ANRESARQTI RRRQAMYEEL  120
TTKAADLASE NKNLKKTKKL AAKEYESLKN ENTNLRIQVA KLEKAEVEET DGGSKSKPVE  180
ISATNTAATP NPTPNPIPVP LVNQSPITPF FWPSIVQPFN GILLQCGSQN ISDITSVLPL  240
PASAELNPIN RQESSNPGNP IFVLPVPCLI PFHPQSSSPF LPWSSTLTDK HFAETSSIHQ  300
CSNSYLNTEN NQAAIAAETD APESVKATQR DFFHEAELRF PPEGGASEGS RQPSSSHIQL  360
GTSEHINAPD IGAVSCTVGH VEDTSEKTSQ ECSTSSSKNP VDPHAAAEAR KRRKELLKLR  420
SQHSDQFGPH H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	409	414	RKRRKE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009798218.1	0.0	PREDICTED: uncharacterized protein LOC104244482
TrEMBL	A0A1U7Y507	0.0	A0A1U7Y507_NICSY; uncharacterized protein LOC104244482
STRING	XP_009798218.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5417	17	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	9e-19	bZIP family protein