PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009795944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29498.2 Da PI: 5.9946 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 63.5 | 6.6e-20 | 7 | 147 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89 GfrF+Ptd+e + +L + v+g++++ + + +++d+y k ePw++ + + + e+++ y ++ ++ k++++ r +r + ++g+Wk+ kd XP_009795944.1 7 EEGFRFRPTDSEGL-TFLLRFVAGQEMHDAGFiTTNIDVYgKQEPWEIYdNgvpCGDDEDNSSYCYFITKLKKKSNARYHRsVRNKGTWKQDAKD 100 68**********99.8899999999988878735566*99456*****7445553334555555444444444456777775778********** PP NAM 90 kevlsk......kgelvglkktLvfykg..rapkgektdWvmheyrl 128 k+v+ k + ++g k+ L + ++ ++ + +W+m+ey+l XP_009795944.1 101 KPVHYKtmgntsSVVNIGSKTCLSYKNKmfYPEDQRDGHWLMKEYEL 147 ****99776544334499*****9995543455666789******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.09E-17 | 4 | 168 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 22.387 | 6 | 170 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.6E-13 | 8 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MEHLKLEEGF RFRPTDSEGL TFLLRFVAGQ EMHDAGFITT NIDVYGKQEP WEIYDNGVPC 60 GDDEDNSSYC YFITKLKKKS NARYHRSVRN KGTWKQDAKD KPVHYKTMGN TSSVVNIGSK 120 TCLSYKNKMF YPEDQRDGHW LMKEYELSKV ILHKLDEDRR DYVLCAIKKL KHVNSSSETS 180 TTTMLNFDQS VLPDMYSNSA HVVYSEVADH MTYMSQINSK KVPEDVLGLD LWDIMNSDEL 240 HRILEDVSEC CPNGC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009795944.1 | 0.0 | PREDICTED: protein ATAF2-like | ||||
TrEMBL | A0A1U7Y9M1 | 0.0 | A0A1U7Y9M1_NICSY; protein ATAF2-like | ||||
STRING | XP_009795944.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04410.1 | 8e-12 | NAC domain containing protein 2 |