PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009794230.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 372aa    MW: 42912.6 Da    PI: 4.5144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009794230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.81.3e-20121262112
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     p+G rFhPtd e++ +yL   v++++l+ ++  ++ +d+y   ePw++ +   + +++++  yf ++++k+++t kr +r++ +g+Wk +gk +e
  XP_009794230.1  12 PMGHRFHPTDREVL-KYLIGFVRDEPLHSQNElMQVADLYADkEPWQIFEaydQGNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKPQGKGRE 105
                     89**********99.9**********88766647777*997559****74232333344467********************************* PP

             NAM  92 vlskkgelvglkktLvfykgr 112
                     v++ kg+l+g  k+L +  ++
  XP_009794230.1 106 VFDDKGRLMGYVKSLKYIPAN 126
                     ****************98544 PP
2NAM29.52.2e-0912618075128
             NAM  75 nratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     n++ ++g+Wk +gk +ev++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_009794230.1 126 NKSSNNGTWKPQGKGREVFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 180
                     667889*****************************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-198126IPR003441NAC domain
PROSITE profilePS5100521.90111203IPR003441NAC domain
PfamPF023654.3E-812123IPR003441NAC domain
SuperFamilySSF1019416.02E-13126203IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MEYSQAKCFS RPMGHRFHPT DREVLKYLIG FVRDEPLHSQ NELMQVADLY ADKEPWQIFE  60
AYDQGNNNNN TRYFITPQKK EKPTWKRVSR TVGKGTWKPQ GKGREVFDDK GRLMGYVKSL  120
KYIPANKSSN NGTWKPQGKG REVFDDKGRL MGYVKSLKYI PANKSSNNVN GEWLMTEYSL  180
FDRYLAAREI KNKGFVICKI KKKGKPGDKK KGNNIDEVVN DENMRDIEEF INTVLQEDVQ  240
VEDNGIRSNG TIAKLDDQEN NIIQYVEGDQ VRDHVLGLLD STEDIVDVND HEEYVEDCVD  300
EGDEVQVHLL EEYIDSVLQS EDVQAEDNGM MSSNDIIAKD DEENMEYQVE DNQHATFWAS  360
AEDVDLDTIN FC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009794230.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1U7Y6130.0A0A1U7Y613_NICSY; NAC domain-containing protein 78-like
STRINGXP_009794230.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.17e-13NAC domain containing protein 76