PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009794165.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 506aa    MW: 57185.1 Da    PI: 7.1537
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009794165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.21.1e-10218253540
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                     k  rr+++NReAAr+sR+RKka++++Le     L++
  XP_009794165.1 218 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 253
                     7789***********************985555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-8209260No hitNo description
SMARTSM003388.6E-8214280IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266216260IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.94E-7218260No hitNo description
CDDcd147083.54E-22218270No hitNo description
PfamPF001707.2E-8218256IPR004827Basic-leucine zipper domain
PROSITE patternPS000360221236IPR004827Basic-leucine zipper domain
PfamPF141447.2E-32306380IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MGFERAFVES SPEQENKLFV GVSYMDSSNK NHDPLESNNQ ISFGGQHQHH QQQFFYNHHQ  60
QQQLQNNNQI SFGMMQQSSS SSSAIPGSLI SKDSAGAYDL GELDQALFQY LDGQEPSSIQ  120
EQRQNSGMRP PTLNIFPSQP MHVEPSTTNK MNTGLVSPAI SGSKRSSQPS MELSNNLKNN  180
DAPSASGPEP PKAAKREGNR KGPTSSSEQD APKTPDPKTL RRLAQNREAA RKSRLRKKAY  240
VQQLESSRIR LTQLEQELQR ARAQGYYFGG NSLLGGEQNL PVNMANMSSV FDMEYARWLE  300
EHHRLMCELR NAVQEHFPEN ELRIYVDNCV THYDEIMNLK SMLTKSDVFH LVSGMWKTPA  360
ERCFMWMGGF RPSELLKIIL SQIEPLTEQQ LMGICGLQQS TQEAEDALSQ GLEALNHSLS  420
DTIASDALSC PQNMANYMGQ MALAMNKLST LEGFVRQADN LRHQTIHRLH QLLTTRQAAR  480
CFLAIAEYFH RLRALSSLWH ARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY9980180.0AY998018.1 Nicotiana tabacum TGA10 transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009794165.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
RefseqXP_016483583.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1S4B4750.0A0A1S4B475_TOBAC; transcription factor HBP-1b(C38)-like isoform X2
TrEMBLA0A1U7Y5U40.0A0A1U7Y5U4_NICSY; transcription factor HBP-1b(C38)-like isoform X2
STRINGXP_009794164.10.0(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein