PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009793689.1
Organism
Nicotiana sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 171aa    MW: 19698.1 Da    PI: 7.7548
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009793689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.71.4e-143391563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+++NRe+ArrsR RK+++++ L  ++ +L++eN +   ++++  +++ ++k+e+
  XP_009793689.1 33 RKRKRLISNRESARRSRMRKQKYLDDLMAEMSQLKEENNQIVTNINMVDQLYLNVKAEN 91
                    5789**************************************************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-152993IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4843194IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-123388No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-113383No hitNo description
PfamPF001706.1E-113391IPR004827Basic-leucine zipper domain
CDDcd147021.90E-163484No hitNo description
PROSITE patternPS0003603651IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MASSSGTSSR SVIQLRNYGS KNDDHLQQVI NQRKRKRLIS NRESARRSRM RKQKYLDDLM  60
AEMSQLKEEN NQIVTNINMV DQLYLNVKAE NSVLKAQMAE LSHRLQSLKE IIDYKTSANA  120
ATTTKETEDL WNYYGENMNN IDINGGDDSL NLLHVNQLTM ASNDEQIIWS L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13253RKRKRLISNRESARRSRMRKQK
24552RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793689.11e-121PREDICTED: ocs element-binding factor 1-like
RefseqXP_016501594.11e-121PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A1S4CKY81e-119A0A1S4CKY8_TOBAC; bZIP transcription factor 53-like
TrEMBLA0A1U7Y3611e-119A0A1U7Y361_NICSY; ocs element-binding factor 1-like
STRINGXP_009793689.11e-120(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-38basic leucine-zipper 44