PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009783851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | G2-like | ||||||||
Protein Properties | Length: 184aa MW: 21750.8 Da PI: 9.8435 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 89.3 | 3.4e-28 | 24 | 77 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LHe F++ ve+LGG +kAtPk+il+ m++kgL ++hvkSHLQ++R XP_009783851.1 24 PRLRWTPQLHELFIQSVESLGGRNKATPKRILQKMDIKGLKISHVKSHLQMHRN 77 9***************************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.06 | 20 | 80 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.3E-25 | 23 | 79 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.6E-21 | 24 | 78 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 4.84E-13 | 24 | 79 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 2.5E-7 | 25 | 76 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MQIFLMFISK KMRDIRQYKK SLAPRLRWTP QLHELFIQSV ESLGGRNKAT PKRILQKMDI 60 KGLKISHVKS HLQMHRNMKE QPSLHVVMPD FNLFSTLLVS KRLSSKQKEC GSQFSRKERN 120 SSDQNGENIH YNDYREEEGS ISSGMTKEEE QYCEKERNFW PVDNHNFFDS TMENTHINLD 180 LSLS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-16 | 25 | 79 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009783851.1 | 1e-136 | PREDICTED: putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A1U7X2F6 | 1e-134 | A0A1U7X2F6_NICSY; putative Myb family transcription factor At1g14600 | ||||
STRING | XP_009783851.1 | 1e-135 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9459 | 13 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 2e-25 | G2-like family protein |