PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009779504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 142aa MW: 16102.3 Da PI: 9.3482 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41 | 4.2e-13 | 25 | 74 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 k+ +r+++NRe+ArrsR +K+ ++eL+++v +L+a N++ ++ee ++ XP_009779504.1 25 KKRKRMISNRESARRSRMKKQNLVQELTKEVSKLQAANRTIVAKIEETTE 74 899************************************99999998776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.3E-14 | 21 | 85 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.335 | 23 | 76 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.4E-11 | 23 | 75 | No hit | No description |
Pfam | PF00170 | 1.2E-10 | 25 | 74 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-11 | 25 | 77 | No hit | No description |
CDD | cd14702 | 8.86E-14 | 26 | 76 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 28 | 43 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MSALRQSGSS SASEGDQRYA CMDEKKRKRM ISNRESARRS RMKKQNLVQE LTKEVSKLQA 60 ANRTIVAKIE ETTERLTFCT AQNNVLRAQE IELTDWLKSL NDLINHSGLV TDVTNVADCL 120 LKPWQITCSM QQISASSGLF QY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009779504.1 | 1e-101 | PREDICTED: ocs element-binding factor 1-like | ||||
TrEMBL | A0A1U7WXW1 | 1e-100 | A0A1U7WXW1_NICSY; ocs element-binding factor 1-like | ||||
STRING | XP_009779504.1 | 1e-101 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11126 | 15 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 2e-33 | basic region/leucine zipper motif 53 |