PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009759370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | EIL | ||||||||
Protein Properties | Length: 608aa MW: 68968.8 Da PI: 5.2451 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 508.9 | 2.4e-155 | 49 | 425 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 +el++rmw+ +ml +rlke++k+ ke+ + +k+++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gasd+LraWW XP_009759370.1 49 DELERRMWRYRMLWRRLKEKNKN----KEVGGDGAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVTGASDNLRAWW 139 79*******************98....78889999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS EIN3 96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190 kekv+fdrngpaai+kyqa+n i+++ +++++ s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+Gke+wwg+lgl++dq XP_009759370.1 140 KEKVRFDRNGPAAIAKYQADNQIPGRIEDSSV-IVSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPSGKEEWWGQLGLPNDQ 233 *************************9999988.9************************************************************* PP -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXXXXXXXX CS EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtlsceqke 282 +ppykkphdlkkawkv+vLtavikh+sp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee+++++++++ ++ sl ++ ++++s+ +++ XP_009759370.1 234 VPPPYKKPHDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARKLYPDscPQgSLAVGNGSYFISDTSDY 328 *************************************************************************653379999************* PP XXXXXXXXX.XXXXXXXXXX.............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXX CS EIN3 283 dvegkkeskikhvqavktta.............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkns 348 dveg ++++ ++v++ k ++ + ++++krk +ps +++v +k +tc+ ++++s+++++f d++s XP_009759370.1 329 DVEGVDDERNNEVEC-KPHDinlltgimvpkerilmpalapvkgeiidlTSDFIQKRK-HPSFEESVDQK--LYTCEYLHCPYSSYQAGFLDRTS 419 ***666666455555.444558***********************************9.78888888888..7********************** PP XXXXXX CS EIN3 349 isqney 354 ++++++ XP_009759370.1 420 RNNHQM 425 ****96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.3E-127 | 49 | 297 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.2E-75 | 171 | 307 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.57E-61 | 176 | 300 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 608 aa Download sequence Send to blast |
MMMFEEMGFP GNFEFMSDPL GCGGDVAQEV EHKPTGVEEN YSDEEMDVDE LERRMWRYRM 60 LWRRLKEKNK NKEVGGDGAK QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CNAQGFVYGI 120 IPEKGKPVTG ASDNLRAWWK EKVRFDRNGP AAIAKYQADN QIPGRIEDSS VIVSTPHTLQ 180 ELQDTTLGSL LSALMQHCDP PQRRFPLEKG VAPPWWPSGK EEWWGQLGLP NDQVPPPYKK 240 PHDLKKAWKV GVLTAVIKHI SPDIAKIRKL VRQSKCLQDK MTAKESATWL AIINQEEALA 300 RKLYPDSCPQ GSLAVGNGSY FISDTSDYDV EGVDDERNNE VECKPHDINL LTGIMVPKER 360 ILMPALAPVK GEIIDLTSDF IQKRKHPSFE ESVDQKLYTC EYLHCPYSSY QAGFLDRTSR 420 NNHQMDCPFR FNSAQRLGMP PKYQINNENN TVFPTQTATP KPATSSVTAS SSMTVSGLGL 480 PEDGQRMISD LFTFYDNNLQ QNSSICSGNS KILANQNMQQ NQTVELPMDD NFNLGHMEAE 540 AQETSMTMNS AYTSTEFQYD QCKLPFDAPF TGNLNDITDY RFGSPFNMGG SDYSMDQLTK 600 QDISTWYL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 2e-82 | 174 | 307 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 2e-82 | 174 | 307 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY248907 | 0.0 | AY248907.1 Nicotiana tabacum EIL5 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009759370.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A1U7VC37 | 0.0 | A0A1U7VC37_NICSY; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | XP_009759370.1 | 0.0 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |