PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_025210-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15862.2 Da PI: 8.9925 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.7 | 3.3e-47 | 13 | 136 | 1 | 124 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 l pGfrFhPtdeelv +yL++kve+k++++ e +k++diyk++PwdLp ++ ++ke+yfF+ r +ky+++ r+nr+t sg+Wkatg d++++s NNU_025210-RA 13 LLPGFRFHPTDEELVGFYLRRKVENKPISV-ELVKQIDIYKYDPWDLP-ITTVGDKELYFFCIRGRKYKNSIRPNRVTGSGFWKATGIDRPIYSVe 106 579***************************.89***************.445689**************************************986 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmh 124 ++e +glkk+Lv+y+g+a kg+ktdW+mh NNU_025210-RA 107 dTNECIGLKKSLVYYRGSAGKGTKTDWMMH 136 66677************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.68E-48 | 8 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 47.288 | 13 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-22 | 15 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MTQLDNSKDD EILLPGFRFH PTDEELVGFY LRRKVENKPI SVELVKQIDI YKYDPWDLPI 60 TTVGDKELYF FCIRGRKYKN SIRPNRVTGS GFWKATGIDR PIYSVEDTNE CIGLKKSLVY 120 YRGSAGKGTK TDWMMH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-42 | 1 | 136 | 3 | 136 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010246011.1 | 6e-98 | PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 | ||||
Swissprot | Q9SK55 | 5e-72 | NAC42_ARATH; Transcription factor JUNGBRUNNEN 1 | ||||
TrEMBL | A0A1U7Z1S7 | 1e-96 | A0A1U7Z1S7_NELNU; transcription factor JUNGBRUNNEN 1-like isoform X1 | ||||
STRING | XP_010246011.1 | 2e-97 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 2e-74 | NAC domain containing protein 42 |