PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022661-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 163aa    MW: 18104.3 Da    PI: 4.8859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022661-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.89.9e-171464155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++y GVr++k +g+Wv+eIr+p +   r r +lg++ t+e Aa a++ a  +l+g
  NNU_022661-RA 14 KKYNGVRRRK-WGKWVSEIRVPGT---RDRLWLGSYSTPEAAAVAHDTALFCLRG 64
                   589****998.**********943...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.00E-291476No hitNo description
Gene3DG3DSA:3.30.730.105.6E-261574IPR001471AP2/ERF domain
PfamPF008471.7E-91564IPR001471AP2/ERF domain
PROSITE profilePS5103221.6281574IPR001471AP2/ERF domain
SMARTSM003805.9E-311580IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-171575IPR016177DNA-binding domain
PRINTSPR003674.6E-81627IPR001471AP2/ERF domain
PRINTSPR003674.6E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MSHSEEGCSN GDEKKYNGVR RRKWGKWVSE IRVPGTRDRL WLGSYSTPEA AAVAHDTALF  60
CLRGPSSAGH LNFPILLPRI LQADMSPRSI QKAASAAALA VDAQLTKKLP ENEKPVENDE  120
ITPYLDQTQI WDDKYVHSEM NEGSSSVEGE ALSISVEDME IYL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242028.11e-119PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805421e-39ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A1U7YPS11e-118A0A1U7YPS1_NELNU; ethylene-responsive transcription factor ERF020
STRINGXP_010242028.11e-119(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.13e-36ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]