PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_019233-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 304aa    MW: 32693.6 Da    PI: 7.2932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_019233-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19159209255
            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  NNU_019233-RA 159 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAAMAYDRAAYRMRG 209
                    8********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-32158217IPR001471AP2/ERF domain
CDDcd000188.95E-32158217No hitNo description
PROSITE profilePS5103224.276159217IPR001471AP2/ERF domain
PfamPF008471.5E-13159209IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-23159219IPR016177DNA-binding domain
SMARTSM003802.3E-38159223IPR001471AP2/ERF domain
PRINTSPR003675.5E-11160171IPR001471AP2/ERF domain
PRINTSPR003675.5E-11183199IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MYGINSGDSD FAVLESIRKH LLEESEASAN SQMNVQARNQ GQGQGPVYCR SSSFSSLFPC  60
LTDKWGDLPL KEDDSEDMVV FGMLRDACNV GWTPSLGQET AASNFNLTET PVKLEPQETM  120
PETPMASAAV APPISIPSLA QQEKPKPAPA PAAPSKGKHY RGVRQRPWGK FAAEIRDPAK  180
NGARVWLGTF ETAEDAAMAY DRAAYRMRGS RALLNFPLRI GSNEPEPVRV TSKRSSPEPY  240
SPSLSYSSST SSSDNASPKR RRRGVVSSAQ AAPAAAQAGL ETTSRSEVFP VGAPLLCGEQ  300
LLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-41155224170ATERF1
3gcc_A2e-41155224170ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275428.10.0PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ9LW503e-91ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A1U8BFY50.0A0A1U8BFY5_NELNU; ethylene-responsive transcription factor 2-like
STRINGXP_010275428.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-66ethylene responsive element binding factor 1