PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_015520-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 272aa MW: 29758.2 Da PI: 6.577

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_015520-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.4	7.3e-09	84	131	3	50
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 ++ + +r NReA r++R++Kka ++ Lee+vk+L N++L+ +l+ NNU_015520-RA 84 SVTKSKRSSGNREAVRKYRAKKKAHTAYLEEEVKKLRLLNQQLIRRLQ 131 5668899999**********************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-10	82	150	No hit	No description
SMART	SM00338	2.8E-5	82	149	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	1.9E-12	87	139	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.61E-6	87	145	No hit	No description
CDD	cd14686	1.07E-10	94	140	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
MDDGGVDTSD QVFPSNPDVS TDIQGSTSLD VLLDEILKST RTCTHTHTCN LPGPDAAHTH 60 TCYHTHTQVF ASEEDDTPNH KQQSVTKSKR SSGNREAVRK YRAKKKAHTA YLEEEVKKLR 120 LLNQQLIRRL QGQAMLEAEV LRLRSLLIDL RGKIDNELDN LSSQKHYNRS TSFKEGNGGI 180 QSVDGRIGLE CKTNAPCLHP DMGLSVQAGI GVNKQVVVNW EGSCQPPIVD CRVSTNRDVG 240 QNLASGETHP DCSMPGTLDA LGTLVSSTSQ AE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010269693.1	0.0	PREDICTED: basic leucine zipper 23-like
TrEMBL	A0A1U8B269	0.0	A0A1U8B269_NELNU; basic leucine zipper 23-like
STRING	XP_010269693.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	1e-30	bZIP family protein