PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_014110-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

NAC

Protein Properties

Length: 313aa MW: 35564.2 Da PI: 5.3377

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_014110-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58	3.2e-18	17	117	1	109
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew...yfFskrdkkya.tgkrknr.atksgyWkatgkdke 91 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ + e+ w F k++++++ + kr++ +t ++ +++ NNU_014110-RA 17 VPPGFRFHPTEEELLHYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQGC----EEGWvvcRIFRKKNHHKSiEAKRSSSvVTVDAN------THT 101 69**************************.9*************832....344532234444333332133333332222222......222 PP NAM 92 vlskkgelvglkktLvfy 109 v ++++v l ++L + NNU_014110-RA 102 VN--TSRDVALDQILQYM 117 22..24445555555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-16	10	65	IPR003441	NAC domain
PROSITE profile	PS51005	13.745	17	174	IPR003441	NAC domain
Pfam	PF02365	4.7E-8	18	82	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MSEPEDMSLS VNGQSQVPPG FRFHPTEEEL LHYYLRKKVA YEKIDLDVIR DVDLNKLEPW 60 DIQGCEEGWV VCRIFRKKNH HKSIEAKRSS SVVTVDANTH TVNTSRDVAL DQILQYMGRN 120 CKQENETGNT TTSTDRNNTR FPRPTEIAIN NDLQERISQL PALESPTLLS LRKDSIRLDD 180 IQSCSSQVCY QPIQDLHQVF TDDSETSATD QVCGNTNPIY HAESGLSDWT TLDRLLAHHY 240 HLIGQAETCK HLPFFTKDSS MAFGSDPLHL QLRDSNTSSS YHNSQDSSSE NDPWSITRSC 300 YLSTDPPHHV SNA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010267400.1	0.0	PREDICTED: NAC domain-containing protein 43-like
TrEMBL	A0A1U8AI92	0.0	A0A1U8AI92_NELNU; NAC domain-containing protein 43-like
STRING	XP_010267400.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	7e-29	NAC family protein