PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_012925-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 480aa    MW: 53853.4 Da    PI: 9.1874
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_012925-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10196227435
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekv 35 
                    ++  rr+++NReAAr+sR+RKka++++Le   
  NNU_012925-RA 196 DQTLRRLAQNREAARKSRLRKKAYVQQLESSR 227
                    6778************************9754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-4193278IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.898195239IPR004827Basic-leucine zipper domain
CDDcd147081.05E-20197249No hitNo description
PfamPF001703.1E-7197232IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.19E-6199239No hitNo description
PROSITE patternPS000360200215IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-7200230No hitNo description
PfamPF141446.5E-32280354IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MAANKGNNSR TEQQQHHHQI SFGMMQSTSS VPGSLIGSKD TGAYDVGELD QALFLYFEGQ  60
DHSSLQEQRQ NPVIRPPTLN IFPSQPMHVE PFTAKESVAL ISTTSSGSKR SSGPAMELAN  120
PRKDSASATE PPKTVKREAV NRKGPTSSSE QEGPKTPDPK VTSLIAFPRR NKFILFAASL  180
KQRLILIMAV LSFTSDQTLR RLAQNREAAR KSRLRKKAYV QQLESSRVRL NQLEQELQRA  240
RTQGIFFAGG TLVGEPGIPA DATVFDMEYA RWLEENHRLM CELRAAVQEH LPENELRLFV  300
DNCLAHYDAI MNLKSMVVKS DVFHIVSGTW KTPAERCFMW MGGFRPSELI KVLMNHIEPL  360
TEQQILGICG LQQSTHEAEE ALSQGLEALR QSLSDTIASD ALSCPPNMAN YMGQMAVAMN  420
KLSTVEGFVR QADNLRQQTL HRLHQILTTR QAARCFLAIA EYFHRLRALS SLWLSRPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265827.10.0PREDICTED: transcription factor TGA2.3-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1U8ASN50.0A0A1U8ASN5_NELNU; transcription factor TGA2.3-like
STRINGXP_010265827.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-162bZIP family protein