PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_012683-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 453aa    MW: 50049.8 Da    PI: 6.5142
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_012683-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.57.6e-10165201339
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                    + k  rr+++NReAAr+sR+RKka++++Le    +L+
  NNU_012683-RA 165 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLT 201
                    568899************************8655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-7161210No hitNo description
SMARTSM003387.3E-7163228IPR004827Basic-leucine zipper domain
PfamPF077165.8E-7163213IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128165209IPR004827Basic-leucine zipper domain
CDDcd147085.42E-23167218No hitNo description
SuperFamilySSF579598.13E-7167209No hitNo description
PROSITE patternPS000360170185IPR004827Basic-leucine zipper domain
PfamPF141441.0E-30251325IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MQSFVEVSTN SIMYCSSSFV RCDEGSRNQS RFLDLGELEQ STGFHHDDVV NVNPGSVFGL  60
KSSNVAVSTS PQFGGLSTNI SSSDITSATG VDTGQYSFHK GTMPVAAPLG NGHFENWGDS  120
GMVDNSQQTD TSTDLDTDEK NQFRGVQQGA LVSVDSTDRS KTKSDQKTLR RLAQNREAAR  180
KSRLRKKAYV QQLESSRLKL TQLEQEIQRA RQQGIFIANG YSGDQSHSAG GNGALAFDME  240
YARWLDEHQR HINDLRTAVN SSVGDNDLRL LVDNVMTHYD ELFRLKSIGA KSDVFHMLSG  300
MWKTPAERCF MWLGGFRSSE LLKILGNHLE PLTDQQLMGI CNLQQSSQQA EDALSQGMEA  360
LQQSLAETLS SGSLGPSGSG NVADYMGQMA LAMGKLGTLE NFLHQADLLR QQTLQQMHRI  420
LTTRQAARAL LVISDYFSRL RALSSLWLAR PRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265199.10.0PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A1U8AHE40.0A0A1U8AHE4_NELNU; transcription factor TGA2.2-like isoform X1
STRINGXP_010265199.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-157bZIP family protein