PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_011790-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

Dof

Protein Properties

Length: 338aa MW: 35911.7 Da PI: 8.5727

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_011790-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.6	6.3e-39	62	121	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++++cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk+k++s NNU_011790-RA 62 HQNVRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKNTS 121 6889****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.3E-32	63	119	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.264	65	119	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-24	65	115	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	67	103	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MIQELLGNTS AGLVGGERNI SIGAGVLEGS SPSLSSSSST TTTATTTTST TTTTTSSGSS 60 EHQNVRCPRC DSSNTKFCYY NNYNLTQPRH FCKTCRRYWT KGGALRNVPI GGGCRKSKNT 120 SMSTASAAKS SMGKVKVASE IVKSSLGSGF DHDPPSNPIL WATPQNSQLL ALLRASQNLN 180 PNPNPNPICN PVTIKDEAGI IGSHVTSDSS AVTGAINARV LNLDPLTQVP IGLCSSFWRN 240 NLHQTHHHHH HQSHQQQHTL LLGEVQNSGI QDLYQRLRQS VNYYDNSASV QSNVAAVAAP 300 SSSSSSIIEP APVAGGELGY WNAAFSWSDL STTNGAFP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010263771.1	0.0	PREDICTED: dof zinc finger protein DOF5.7-like
TrEMBL	A0A1U8AAJ4	0.0	A0A1U8AAJ4_NELNU; dof zinc finger protein DOF5.7-like
STRING	XP_010263771.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-31	DOF zinc finger protein 1