PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_011645-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 412aa MW: 44046.2 Da PI: 9.0172

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_011645-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3.1e-15	343	386	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ eN++L+k+ NNU_011645-RA 343 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKDENQELQKK 386 79**************************************9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.8E-12	339	405	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.139	341	386	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-15	343	389	No hit	No description
SuperFamily	SSF57959	1.94E-11	343	386	No hit	No description
CDD	cd14707	1.77E-25	343	389	No hit	No description
Pfam	PF00170	6.5E-13	343	386	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	346	361	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence Send to blast
MNFKNAGDVP PPEGSGGSGR LSGNFLLARQ PSIYSLTFDE FQNTMGGLGK DFGSMNMDEF 60 LKNIWTAEEA QAMASFGGAE GGFPGGGLQR QGSLTLPRTL SQKTVDEVWR DIFKESGGGK 120 DGNSNGGSNL QQRQQTLGEM TLEEFLVKAG VVREDTQAAG RLNNSGFCGE ISCPNDIISL 180 ALGFPQPGRT NGIVSNCATE NINTVHSQSP SLAINTNGVG SCQPSLQQQQ QYLQRIFPKQ 240 PTVAYASPMH LGNTNQLSSS AIRGGIADST MNNSFGQGGG MGTVGIGAGA VTVATGSPAN 300 QLSSDGLGKS NGDTPSLSPV PYPFNGGLRG RRCSGAVEKV VERRQRRMIK NRESAARSRA 360 RKQAYTMELE AEVAKLKDEN QELQKKQVLE MINQQWGNNK KQCLRRTQTG PW

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence Send to blast

MNFKNAGDVP PPEGSGGSGR LSGNFLLARQ PSIYSLTFDE FQNTMGGLGK DFGSMNMDEF  60
LKNIWTAEEA QAMASFGGAE GGFPGGGLQR QGSLTLPRTL SQKTVDEVWR DIFKESGGGK  120
DGNSNGGSNL QQRQQTLGEM TLEEFLVKAG VVREDTQAAG RLNNSGFCGE ISCPNDIISL  180
ALGFPQPGRT NGIVSNCATE NINTVHSQSP SLAINTNGVG SCQPSLQQQQ QYLQRIFPKQ  240
PTVAYASPMH LGNTNQLSSS AIRGGIADST MNNSFGQGGG MGTVGIGAGA VTVATGSPAN  300
QLSSDGLGKS NGDTPSLSPV PYPFNGGLRG RRCSGAVEKV VERRQRRMIK NRESAARSRA  360
RKQAYTMELE AEVAKLKDEN QELQKKQVLE MINQQWGNNK KQCLRRTQTG PW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010263534.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X2
Swissprot	Q9M7Q4	1e-110	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U8ADG6	0.0	A0A1U8ADG6_NELNU; ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X2
STRING	XP_010263531.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-100	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]