PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_011326-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 418aa MW: 45770.5 Da PI: 5.165

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_011326-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.2	4.3e-14	236	291	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr +NR++ArrsR++K+a +++Le v++L ++N +L k+ + +++ ++ NNU_011326-RA 236 DSKRLRRIVSNRLSARRSREKKQAHLAQLELQVDQLRGQNATLYKKFNDASQQFKE 291 689*****************************************999888877665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-11	234	298	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.2E-10	235	290	No hit	No description
PROSITE profile	PS50217	10.404	236	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.7E-11	237	288	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.44E-10	238	288	No hit	No description
CDD	cd14702	1.07E-17	239	289	No hit	No description
PROSITE pattern	PS00036	0	241	256	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence Send to blast
MAIEHTMDQQ TFGGLVFCDT TRPQNLNYSS VFGGNMKRSA SELKLEELLG RIMAPETGEN 60 ENWSNIQRAR KSGETDGFSG AQVQDNSFND VYATAGDLGF GSRDRDTVND LISYGGLTES 120 GFRAQNLTPK HSNISATMDS QSSVCGKELM IPNPWLRTQL LWVCSGFYLF TGGPASSLTF 180 GYTGTASAGS PASANQPKSV DTQGRGAASG SSQEQSDEDD IEIEAGSCEQ SNSITDSKRL 240 RRIVSNRLSA RRSREKKQAH LAQLELQVDQ LRGQNATLYK KFNDASQQFK EAATDNRVLK 300 SDIEALRLKV RLAEDIVTRG SLTCSLNYLL QSHSNSPQLL NTNQLFRASE VLASMDNQGQ 360 DTAYGEIAAL GSGNGDTDGS IKNRLNWNQP PCQRMTSLEH LQSKIDSDHL SCMAEFWP

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence Send to blast

MAIEHTMDQQ TFGGLVFCDT TRPQNLNYSS VFGGNMKRSA SELKLEELLG RIMAPETGEN  60
ENWSNIQRAR KSGETDGFSG AQVQDNSFND VYATAGDLGF GSRDRDTVND LISYGGLTES  120
GFRAQNLTPK HSNISATMDS QSSVCGKELM IPNPWLRTQL LWVCSGFYLF TGGPASSLTF  180
GYTGTASAGS PASANQPKSV DTQGRGAASG SSQEQSDEDD IEIEAGSCEQ SNSITDSKRL  240
RRIVSNRLSA RRSREKKQAH LAQLELQVDQ LRGQNATLYK KFNDASQQFK EAATDNRVLK  300
SDIEALRLKV RLAEDIVTRG SLTCSLNYLL QSHSNSPQLL NTNQLFRASE VLASMDNQGQ  360
DTAYGEIAAL GSGNGDTDGS IKNRLNWNQP PCQRMTSLEH LQSKIDSDHL SCMAEFWP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010263250.1	0.0	PREDICTED: basic leucine zipper 63-like isoform X1
TrEMBL	A0A1U8ACS9	0.0	A0A1U8ACS9_NELNU; basic leucine zipper 63-like isoform X1
STRING	XP_010263250.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	4e-39	basic leucine zipper 9