PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_009725-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 297aa MW: 33067.9 Da PI: 7.2187

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_009725-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.5	2.2e-11	169	216	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ l NNU_009725-RA 169 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFL 216 8999*********************************99998776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.7E-14	165	229	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.714	167	230	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.21E-11	169	223	No hit	No description
Pfam	PF00170	6.0E-10	169	214	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.9E-12	169	221	No hit	No description
CDD	cd14703	2.05E-23	170	220	No hit	No description
PROSITE pattern	PS00036	0	172	187	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MAQLPPKIPN MAPNWPNFPH QKMPGMGSLT HSTIQQPSWV DEFLDFSSAK RGAHRRSASD 60 SITFLEAPMI EECRNSPSSL KPGSNEFERL DDEQLMSMFS DDISGNVPPT GSSSNPSTPS 120 DHNSINDEKP TPSDQQERNE SAEVQSSCKP DPQVPPPLSS TGEPIVDPKR VKRILANRQS 180 AQRSRVRKLQ YISELERSVT TLQTEVSALS PRVAFLDHQR LVLNVDNSAL KQRIAALAQD 240 KIFKDAHQEA LKKEIERLRQ VYHNQQNLKK MGNNTRPPPP SDNPGPGGGT EKEQLLN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010260405.1	0.0	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	1e-117	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A1U8ADV8	0.0	A0A1U8ADV8_NELNU; basic leucine zipper 61-like
STRING	XP_010260405.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-107	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]