PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_009703-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

VOZ

Protein Properties

Length: 482aa MW: 54082.4 Da PI: 5.1609

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_009703-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	452.9	3.4e-139	210	426	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpaqgsew++dycssfha+lalneg+pg+tpvlrp+gi+lkdg+lfaalsak+qgk+vgipecegaat+kspwna+elf NNU_009703-RA 210 PPPSAFLGPKCALWDCPRPAQGSEWCRDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPECEGAATTKSPWNAPELF 305 89******************************************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde 192 dls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmke+gglkrsyymdpqp+++fewhlyeyein++da+alyrlelklvd+ NNU_009703-RA 306 DLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEYGGLKRSYYMDPQPLNNFEWHLYEYEINNCDACALYRLELKLVDG 401 ******************************************************************************************** PP VOZ 193 kksakgkvskdsladlqkklgrlta 217 kks+kgk+++dsladlqk++grlta NNU_009703-RA 402 KKSPKGKITNDSLADLQKQMGRLTA 426 *********************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence Send to blast
MGKGSKNACK SASHQLFKDK AKNRVDDLQG MFTDLQFARK ESRTSDVAVL EEQVHQMLRE 60 WKAELNEPSP ASSLLGGSLG SFSSDICRLL QRCDEEDDAT SALAETTNPK PEPDVQSLPM 120 GITTVYQEEY FMNQGPQEHD FQGIHRCKDT TSGAHNTLIN NMEMTNQLDY YQFDLHQDFD 180 HNTFIGFNGD GECGEDSMPH LSSYLPNFCP PPSAFLGPKC ALWDCPRPAQ GSEWCRDYCS 240 SFHAALALNE GPPGMTPVLR PGGIGLKDGP LFAALSAKTQ GKDVGIPECE GAATTKSPWN 300 APELFDLSVL EGETIREWLF FDKPRRAFES GNRKQRSLPD YSGRGWHESR KQVMKEYGGL 360 KRSYYMDPQP LNNFEWHLYE YEINNCDACA LYRLELKLVD GKKSPKGKIT NDSLADLQKQ 420 MGRLTAEFPT DNKRSVKGRT RVNSRDVYST PNQLVPSNEN FGYGVGAPYG YLVENLNEYY 480 GT

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence Send to blast

MGKGSKNACK SASHQLFKDK AKNRVDDLQG MFTDLQFARK ESRTSDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLLGGSLG SFSSDICRLL QRCDEEDDAT SALAETTNPK PEPDVQSLPM  120
GITTVYQEEY FMNQGPQEHD FQGIHRCKDT TSGAHNTLIN NMEMTNQLDY YQFDLHQDFD  180
HNTFIGFNGD GECGEDSMPH LSSYLPNFCP PPSAFLGPKC ALWDCPRPAQ GSEWCRDYCS  240
SFHAALALNE GPPGMTPVLR PGGIGLKDGP LFAALSAKTQ GKDVGIPECE GAATTKSPWN  300
APELFDLSVL EGETIREWLF FDKPRRAFES GNRKQRSLPD YSGRGWHESR KQVMKEYGGL  360
KRSYYMDPQP LNNFEWHLYE YEINNCDACA LYRLELKLVD GKKSPKGKIT NDSLADLQKQ  420
MGRLTAEFPT DNKRSVKGRT RVNSRDVYST PNQLVPSNEN FGYGVGAPYG YLVENLNEYY  480
GT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010260370.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1U8A0G4	0.0	A0A1U8A0G4_NELNU; transcription factor VOZ1
STRING	XP_010260370.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]