PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_009596-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | bHLH | ||||||||
Protein Properties | Length: 181aa MW: 20637.7 Da PI: 9.9572 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.4 | 2.3e-12 | 12 | 61 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +Er+RR+++++ ++eL +l+P+ +++ +s + L +A +YIk+Lq NNU_009596-RA 12 DRKTVERNRRNHMKNLYSELNSLIPNH--SSKETMSLPDQLNEAANYIKKLQ 61 56889*********************7..15555*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.379 | 8 | 60 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.24E-8 | 8 | 65 | No hit | No description |
SuperFamily | SSF47459 | 4.32E-14 | 9 | 75 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.4E-14 | 10 | 79 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.4E-8 | 13 | 61 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.6E-5 | 14 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MESHPNASSK TDRKTVERNR RNHMKNLYSE LNSLIPNHSS KETMSLPDQL NEAANYIKKL 60 QRKLERMKEK KENLMGINKL SRSISSGMMV GVKSPHIEIH DMGSALHVVL TSGLDQQFMF 120 YEVVRLLHEE GAQIVNANFS IIDDMIFHTV HSEIGESMHG FGAARISRRL KKFVSEFVNA 180 S |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010260225.1 | 1e-131 | PREDICTED: transcription factor bHLH36-like | ||||
Swissprot | F4JIJ7 | 3e-49 | BH162_ARATH; Transcription factor bHLH162 | ||||
TrEMBL | A0A1U8A5P9 | 1e-129 | A0A1U8A5P9_NELNU; transcription factor bHLH36-like | ||||
STRING | XP_010260225.1 | 1e-130 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-51 | bHLH family protein |
Publications ? help Back to Top | |||
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