PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_007949-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 428aa    MW: 47877.5 Da    PI: 7.895
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_007949-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.1e-11138177544
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++
  NNU_007949-RA 138 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 177
                    7789************************876666655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-8131180No hitNo description
SMARTSM003381.5E-8134219IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289136180IPR004827Basic-leucine zipper domain
PfamPF001702.5E-8138178IPR004827Basic-leucine zipper domain
CDDcd147083.16E-22138190No hitNo description
SuperFamilySSF579594.25E-7138180No hitNo description
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
PfamPF141444.5E-30228302IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MMQPTSSFSG NLISGKDTGA YDLGELDQAL FLYLEGQDHS SLQEQRQSPG IRPPTLNIFP  60
SQPMHVEPSP TKGSAVFVSP TATNTGPKRS SEPTMELSNP KNDKASGPEP AKTAKREVNR  120
KGPTSSSEQE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK LTQLEQELQR  180
ARAQGVLFGG GALLEDQGTP LGITNLSSDA AMFDMEYARW LEEHHRLMCD LRAAVQEHLP  240
ENELRLFVDN CLAHYNQIIN LKSMIVKSDV FHIVSGLWKT PAERCFMWMG GFRPSEIIKI  300
LLNHMEPLTE QQILGICGLQ QSTQEAEEAL SQGLEALHQS LSDTIASDAL NCPSNMANYM  360
GQMAIAINKL STLEGFVRQA DNLRQQTLYR LHQILTTRQA ARCFLAIAEY FHRLRALSSL  420
WLARPRLD
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257393.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1U7ZUT30.0A0A1U7ZUT3_NELNU; transcription factor HBP-1b(C38)-like
STRINGXP_010257393.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.30.0bZIP family protein