PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_006481-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | NAC | ||||||||
Protein Properties | Length: 408aa MW: 45590.5 Da PI: 6.1931 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 82.4 | 9.6e-26 | 8 | 129 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya.tgkrknra...tksgyWkatgkdkevl 93 pp f Fh tdeel+ +++ +g ++++ ++i++v+ ++v Pw+ p e+ wyfF++ k++ tg k ++gyW+atg+d+ vl NNU_006481-RA 8 PPEFGFHLTDEELL-ASMERMENGAPTPA-NIITDVNPCDVLPWNSP------ENMWYFFHSDGPKTTeTGYWKATGedpKTTGYWQATGEDHMVL 95 78899*********.55899989999888.89**************9......578*****9998876234333321233448************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ ++g k+tL fy+g+ap+g kt+W+mheyr+ NNU_006481-RA 96 K-NSPNTGWKTTLEFYTGEAPNGIKTNWMMHEYRM 129 9.9999***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-29 | 6 | 148 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.028 | 7 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-13 | 8 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence Send to blast |
MCPFGHVPPE FGFHLTDEEL LASMERMENG APTPANIITD VNPCDVLPWN SPENMWYFFH 60 SDGPKTTETG YWKATGEDPK TTGYWQATGE DHMVLKNSPN TGWKTTLEFY TGEAPNGIKT 120 NWMMHEYRMN QKEGSSGQGF NSLCRVFLNH SHNPKHELQR NHAGMDNSSR HHTHLASPIM 180 QDAEQNNNNR QDQPNRSQVT GRVNENRPLR VFDSHLPDNG PEDPIQGQHE IYDFSKGDYL 240 ELLDLVDPES PSSSSENSSC LTMSSDEYFD SWALLQDLDA CNNQGIQQKN PNCKLNVFKS 300 VGSNKIVVRS SSSGSLHGCD RSNLSRRPML ISDPSLPGSS VEQKFLNSES SKHERCLPKL 360 GDTVEGLSST LENGVASSSG LPAASRGKGK AVSRMSKLKK KYWCFMPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-19 | 7 | 155 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-19 | 7 | 155 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-19 | 7 | 155 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-19 | 7 | 155 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-19 | 7 | 155 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 3e-19 | 7 | 155 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 3e-19 | 7 | 155 | 17 | 171 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010254952.1 | 0.0 | PREDICTED: NAC domain-containing protein 83-like | ||||
TrEMBL | A0A1U7ZSC7 | 0.0 | A0A1U7ZSC7_NELNU; NAC domain-containing protein 83-like | ||||
STRING | XP_010254952.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.1 | 3e-28 | NAC domain containing protein 41 |