PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_006339-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 153aa    MW: 17474.5 Da    PI: 6.1041
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_006339-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.3e-133088563
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                   ++++r+ +NRe+ArrsR RK++ ++ L   v+ L +eN +    ++  ++++ + ++e+
  NNU_006339-RA 30 RKQKRMLSNRESARRSRMRKQKHLDDLMAQVAHLRKENNQILTSINITTQHYLTIEAEN 88
                   79*************************************99999998888887776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-102175No hitNo description
SMARTSM003388.5E-192690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.532891IPR004827Basic-leucine zipper domain
PfamPF001701.6E-103080IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.81E-133082No hitNo description
CDDcd147021.35E-183181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MASSSGTSSG SSTLQSSGSE EDLQQVIDQR KQKRMLSNRE SARRSRMRKQ KHLDDLMAQV  60
AHLRKENNQI LTSINITTQH YLTIEAENSV LRAQMEELSH RLQSLNEIIN CLNPGNNAFE  120
TEDSQINTDS FINPWNLMYL NQPIMASADI FQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010254730.11e-110PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L52e-55BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1U7ZRT41e-108A0A1U7ZRT4_NELNU; bZIP transcription factor 11-like
STRINGXP_010254730.11e-109(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-53basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]