PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_002737-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19856.4 Da PI: 10.4294 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.3 | 2.5e-11 | 57 | 109 | 4 | 56 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK++ +e L++ L eN + +l ++ ++ NNU_002737-RA 57 ERKRRRMISNRESARRSRMRKQKHLEDLRDQLNRLRVENGEITTRLGIITRNC 109 5678999********************************99988887776666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-9 | 50 | 108 | No hit | No description |
SMART | SM00338 | 1.8E-14 | 54 | 118 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.657 | 56 | 119 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 58 | 112 | No hit | No description |
Pfam | PF00170 | 6.2E-9 | 58 | 110 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 3.80E-18 | 59 | 110 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 61 | 76 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MLPDFDLPPC PVFEGGFTPW ESQEFVSLFQ TPLKQENSAN SNSGSDEPNR AVSAEDERKR 60 RRMISNRESA RRSRMRKQKH LEDLRDQLNR LRVENGEITT RLGIITRNCH LIRRDNDRLK 120 SESVLLRQRL SDISRILLYR QLQQFSSPSL CPSTNRPLNL NYNNGLHLIP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 61 | RKRRR |
2 | 57 | 78 | RKRRRMISNRESARRSRMRKQK |
3 | 70 | 77 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021274424.1 | 4e-53 | basic leucine zipper 4-like | ||||
TrEMBL | A0A200PSH2 | 4e-55 | A0A200PSH2_9MAGN; Basic-leucine zipper domain | ||||
STRING | XP_010248350.1 | 1e-120 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 1e-27 | basic leucine-zipper 5 |