PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_002384-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | ERF | ||||||||
Protein Properties | Length: 147aa MW: 16186.1 Da PI: 4.4597 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 gy+GVr ++ +g+Wv+eIr+p++ + r++lg+f t+e+Aa a++ a+++l+g NNU_002384-RA 22 GYRGVRVRR-SGKWVSEIREPKK---SSRIWLGTFPTPEMAATAYDVAALALKG 71 8*****999.7*********954...5***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 9.15E-18 | 22 | 73 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 20.455 | 22 | 83 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.7E-24 | 22 | 85 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.2E-12 | 22 | 71 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.23E-27 | 23 | 75 | No hit | No description |
PRINTS | PR00367 | 5.6E-8 | 23 | 34 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.0E-25 | 23 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.6E-8 | 45 | 61 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence Send to blast |
MNSDGRFPGF GTNTIPGHKP GGYRGVRVRR SGKWVSEIRE PKKSSRIWLG TFPTPEMAAT 60 AYDVAALALK GLTSRDQGKI NSSSVISEIS LDSNEYIDED FIFDMPNLLL NMAEGMLLSP 120 PPLEVAEDEE DEVTTESTGN QNLWSHP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019052225.1 | 4e-87 | PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF024 | ||||
Swissprot | Q9SJR0 | 1e-30 | ERF24_ARATH; Ethylene-responsive transcription factor ERF024 | ||||
TrEMBL | A0A1U8Q2G3 | 8e-86 | A0A1U8Q2G3_NELNU; LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF024 | ||||
STRING | XP_010248418.1 | 1e-84 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-11 | ERF family protein |