PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_002027-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 424aa MW: 45532.8 Da PI: 9.638

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_002027-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.2	1.1e-15	347	399	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ e+ ++ + NNU_002027-RA 347 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELQKRQAEIMEMQK 399 79*****************************************9999988865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.7E-14	343	407	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.346	345	396	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.75E-11	347	396	No hit	No description
CDD	cd14707	5.05E-26	347	399	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.0E-15	347	396	No hit	No description
Pfam	PF00170	1.5E-13	347	399	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	350	365	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence Send to blast
MGSHMNFKNV GDAQPLEGNT GSGRPPGNLP LARQPSIFSL TLDEVQNTMG GLGKDFGSMN 60 MDEFLKNIWT AEEAQAMAST FGGTEGGVPG TNLQRQGSLT LPRTLSQKTV DEVWRDIFKE 120 SASGKDGSGS GGSNLQSRQQ TLGEMTLEEF LVKAGVVRED IQTGTPNNSG MYVETRSNDN 180 IGLALGFPQP GQTNGVVLNR IAESNNPVHT QSPNLAININ GARSSQPQQQ QQLPQLFAKQ 240 STVAFASAMH LANTNQLSNP GMRGGVADPM LNNGFGQGGG PQSGGMGMVG LGAGAVTVAT 300 GSPANQLSSD GLGKSNGDTS SLSPVPYPFN SLRGRRCSGA VEKVVERRQR RMIKNRESAA 360 RSRARKQAYT MELEAEVAKL KEENQELQKR QAEIMEMQKY QDETMNQQNG NKKRCLRRTQ 420 TGPW

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence Send to blast

MGSHMNFKNV GDAQPLEGNT GSGRPPGNLP LARQPSIFSL TLDEVQNTMG GLGKDFGSMN  60
MDEFLKNIWT AEEAQAMAST FGGTEGGVPG TNLQRQGSLT LPRTLSQKTV DEVWRDIFKE  120
SASGKDGSGS GGSNLQSRQQ TLGEMTLEEF LVKAGVVRED IQTGTPNNSG MYVETRSNDN  180
IGLALGFPQP GQTNGVVLNR IAESNNPVHT QSPNLAININ GARSSQPQQQ QQLPQLFAKQ  240
STVAFASAMH LANTNQLSNP GMRGGVADPM LNNGFGQGGG PQSGGMGMVG LGAGAVTVAT  300
GSPANQLSSD GLGKSNGDTS SLSPVPYPFN SLRGRRCSGA VEKVVERRQR RMIKNRESAA  360
RSRARKQAYT MELEAEVAKL KEENQELQKR QAEIMEMQKY QDETMNQQNG NKKRCLRRTQ  420
TGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010269648.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Refseq	XP_010269652.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Refseq	XP_010269660.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Refseq	XP_019054745.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
Swissprot	Q9M7Q4	1e-115	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U8APC8	0.0	A0A1U8APC8_NELNU; ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X1
STRING	XP_010269648.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-94	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]