PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | NNU_000023-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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Family | G2-like | ||||||||
Protein Properties | Length: 512aa MW: 57237.4 Da PI: 6.7436 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 52.9 | 8e-17 | 131 | 185 | 1 | 55 |
G2-like 1 kprlrWtpe.LHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l+W + LH+ F+++++++ G e+AtP ++l+lm+v+g+t+++v SHLQ+ R+ NNU_000023-RA 131 KPKLCWEDNgLHDLFMDVIRKI-GLENATPAKLLKLMNVPGITVQQVTSHLQRLRT 185 79****8644************.9*****************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50110 | 10.561 | 1 | 39 | IPR001789 | Signal transduction response regulator, receiver domain |
Gene3D | G3DSA:1.10.10.60 | 4.3E-16 | 128 | 188 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.69E-9 | 130 | 188 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.5E-15 | 131 | 185 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence Send to blast |
MSDNIDMSTA IRVLENGACF FHMKPLSMDA LWGIWQHVLI KRVSQRRETE EAGSMEDVGF 60 FKALEGIDCQ SLVNGRRTKF KRMREEHEES KGNQKTNNED LKEKKKSKGM ALAAEEEQCE 120 SKNTVSSRAK KPKLCWEDNG LHDLFMDVIR KIGLENATPA KLLKLMNVPG ITVQQVTSHL 180 QRLRTYVRSR NQLAATMKKR GRKDRSIFNV PIGPAPKTSH PFSQSDIAPR IDLSQQLSRN 240 RRQEAMLHAR LPATTHENQM LPFHAQRRNG NLSGIFDMML AQDWRMGASS SCIEPAGRSD 300 ATQMIHPHLQ VEPRELESRA VDDQRMLSLS AQTQNISYLG HVGSLDSSFQ QPSMENILSS 360 PGVQMMNNVE PPRPSNSLNR DQPTRAPVNG IQNICPCPNS SLNQDQPTRT QADGIQNVCD 420 VGGAGHCQNA ELMEESGDTL DDLAGSFCLD FNDLMESPPF ENSTSVPSKQ LDGVDFDKVF 480 SDQCVANIES QQQSHMGNNP RSDFSVKFTD GA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010243610.2 | 0.0 | PREDICTED: uncharacterized protein LOC104587367 isoform X2 | ||||
Refseq | XP_019054495.1 | 0.0 | PREDICTED: uncharacterized protein LOC104587367 isoform X1 | ||||
TrEMBL | A0A1U7YTF6 | 0.0 | A0A1U7YTF6_NELNU; uncharacterized protein LOC104587367 isoform X2 | ||||
TrEMBL | A0A1U8Q8T6 | 0.0 | A0A1U8Q8T6_NELNU; uncharacterized protein LOC104587367 isoform X1 | ||||
STRING | XP_010243610.1 | 0.0 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 2e-23 | response regulator 1 |