PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf14843g01001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 353aa MW: 38896.4 Da PI: 6.7842 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.7 | 2.8e-10 | 239 | 287 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+el+P + +k Ka +L + ++Y++sLq Niben101Scf14843g01001.1 239 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 287 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.73E-11 | 234 | 291 | No hit | No description |
SuperFamily | SSF47459 | 4.45E-17 | 234 | 304 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.472 | 236 | 286 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.1E-16 | 236 | 304 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.4E-7 | 239 | 287 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.1E-10 | 242 | 292 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 353 aa Download sequence Send to blast |
MASKDNGDMR LQLRNGGDTS FTCPSSMPNV DPFSGSGWDP LLSLNQKESF KGCSVVGHNE 60 FGNLPYQSSH FGHYPSDPNL VEMVPKIPAF GNESFSELVN TFPLQEQLRG GSCYPNYVNN 120 RGISAEGAFL KGPQSQEECQ ISGEGAVETS PNGKRKISGN HSLSNLSKNV EGELQKAPSR 180 DNSDCSKEQD GKKHKTDQNN SSNLRSKESG KQVKEDSDGG EPPKDNYVHI RAKRGQATNS 240 HSLAERVRRE RISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV 300 NPELNFDIDR ILSKEMLHQQ TSNAVLLGLG PGMSYSLPFP GISHGSFTEC MRQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019262620.1 | 0.0 | PREDICTED: transcription factor bHLH74 isoform X1 | ||||
Refseq | XP_019262621.1 | 0.0 | PREDICTED: transcription factor bHLH74 isoform X1 | ||||
Refseq | XP_019262622.1 | 0.0 | PREDICTED: transcription factor bHLH74 isoform X1 | ||||
Refseq | XP_019262623.1 | 0.0 | PREDICTED: transcription factor bHLH74 isoform X2 | ||||
Swissprot | Q6NKN9 | 7e-67 | BH074_ARATH; Transcription factor bHLH74 | ||||
TrEMBL | A0A314L7E0 | 0.0 | A0A314L7E0_NICAT; Transcription factor bhlh74 | ||||
STRING | XP_009590631.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5250 | 24 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 4e-58 | bHLH family protein |
Publications ? help Back to Top | |||
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