PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf07549g02001.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 450aa MW: 48604.4 Da PI: 9.2007

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf07549g02001.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.5e-15	357	408	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ Niben101Scf07549g02001.1 357 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEMLEMQ 408 79***************************************98887766654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.9E-14	353	418	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	355	404	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.75E-29	357	411	No hit	No description
Pfam	PF00170	4.3E-13	357	409	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	8.2E-15	357	406	No hit	No description
SuperFamily	SSF57959	3.19E-11	357	406	No hit	No description
PROSITE pattern	PS00036	0	360	375	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence Send to blast
MGSNFNFKNF GNEPPGEGGS GVGGKQPAIF QLPRQPSIYS LTFDEFLSTT GGNGKDFGSM 60 NMDELLKNIW NAEESQTMGG SGINGQEVGS VQGGNLQRQG SLTLPRTLSH KTVDEVWRDM 120 SKEYGSRKDG NSVGVPTNLP QRQQTLGEIT LEEFLVRAGV VREDAQLVAK SNNVGGVFAD 180 LAYAGNTGVG FGYQQTNRNT GETGIQAANL PLNVNGVRST QQLRAQQLQQ QQPQPQQQQP 240 QQQPLLPKQP ALAYAAPMAI PNNGQLGSPG MRGGMVGFSD PALNSNFVQG AALTGGGMGM 300 VGLGAGAVTV ATASPAVSSD GLGKSSGDTP SVSPVPYVFN GGIRGRKYST VEKVVERRQR 360 RMIKNRESAA RSRARKQAYT MELEAEVAKL KEENEELQKK QEEMLEMQKN QVMEMMNLQX 420 TWGGWKWCWW KAACDISVAA TAIYLFVNVR

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence Send to blast

MGSNFNFKNF GNEPPGEGGS GVGGKQPAIF QLPRQPSIYS LTFDEFLSTT GGNGKDFGSM  60
NMDELLKNIW NAEESQTMGG SGINGQEVGS VQGGNLQRQG SLTLPRTLSH KTVDEVWRDM  120
SKEYGSRKDG NSVGVPTNLP QRQQTLGEIT LEEFLVRAGV VREDAQLVAK SNNVGGVFAD  180
LAYAGNTGVG FGYQQTNRNT GETGIQAANL PLNVNGVRST QQLRAQQLQQ QQPQPQQQQP  240
QQQPLLPKQP ALAYAAPMAI PNNGQLGSPG MRGGMVGFSD PALNSNFVQG AALTGGGMGM  300
VGLGAGAVTV ATASPAVSSD GLGKSSGDTP SVSPVPYVFN GGIRGRKYST VEKVVERRQR  360
RMIKNRESAA RSRARKQAYT MELEAEVAKL KEENEELQKK QEEMLEMQKN QVMEMMNLQX  420
TWGGWKWCWW KAACDISVAA TAIYLFVNVR

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009793574.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_016472325.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-120	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1S4A6S6	0.0	A0A1S4A6S6_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A1U7Y2V2	0.0	A0A1U7Y2V2_NICSY; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRING	XP_009793574.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-85	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]