PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf05391g01009.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 527aa MW: 59073.1 Da PI: 6.5102

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf05391g01009.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	409.8	5.3e-126	248	467	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pp saflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg pg pv+rp gi+lkd+llf+al ak++gk+vg+p+ceg Niben101Scf05391g01009.1 248 PPASAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYPGRPPVVRPMGIGLKDNLLFQALGAKAHGKDVGVPQCEG 332 789********************944459************************************************** PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 aatakspwna+elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ew Niben101Scf05391g01009.1 333 AATAKSPWNAPELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEW 417 ********************************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++da+alyrlelklvd+kk +kgkv++ s++dlqk++grlta Niben101Scf05391g01009.1 418 HLYEYEINKYDAYALYRLELKLVDGKKISKGKVTNVSVSDLQKQMGRLTA 467 **********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence Send to blast
MRLPRIHELS SDCCFLFFRC GVEGIVLFDW MRKVSKRGAC KSASHQLFKD RAKNRVDDLQ 60 GVLTNLQSAR KESRSYDVGL LEEQVHQMLR EWKAELNEPS PASSLQARTT LTPFYVGVLH 120 SWVTLQGGSL VSSSDIYRLL LGEEEDDATS ALAAPKPEPD AQKVSVTGFH GGFNATQMLQ 180 EQGFQLVDQC KGLPLVVSNV GINNLGIATQ LDYHSFDLHQ EYDQQYLPGF DALNLCLEDA 240 LPPIHISPPA SAFLGPKCAL WDCPRPAMGS DWCQKSQDYC SDYHASLAPN EGYPGRPPVV 300 RPMGIGLKDN LLFQALGAKA HGKDVGVPQC EGAATAKSPW NAPELFDLKV VEGETIREWL 360 FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQMMNEFGG LKRSYYMDPQ PMKNLEWHLY 420 EYEINKYDAY ALYRLELKLV DGKKISKGKV TNVSVSDLQK QMGRLTAEFP LDNKRTVKGR 480 AKAANLKNVG NIQAAPIPLV PTCEGFDYGT GEPYDYLVDD LDGYFIT

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence Send to blast

MRLPRIHELS SDCCFLFFRC GVEGIVLFDW MRKVSKRGAC KSASHQLFKD RAKNRVDDLQ  60
GVLTNLQSAR KESRSYDVGL LEEQVHQMLR EWKAELNEPS PASSLQARTT LTPFYVGVLH  120
SWVTLQGGSL VSSSDIYRLL LGEEEDDATS ALAAPKPEPD AQKVSVTGFH GGFNATQMLQ  180
EQGFQLVDQC KGLPLVVSNV GINNLGIATQ LDYHSFDLHQ EYDQQYLPGF DALNLCLEDA  240
LPPIHISPPA SAFLGPKCAL WDCPRPAMGS DWCQKSQDYC SDYHASLAPN EGYPGRPPVV  300
RPMGIGLKDN LLFQALGAKA HGKDVGVPQC EGAATAKSPW NAPELFDLKV VEGETIREWL  360
FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQMMNEFGG LKRSYYMDPQ PMKNLEWHLY  420
EYEINKYDAY ALYRLELKLV DGKKISKGKV TNVSVSDLQK QMGRLTAEFP LDNKRTVKGR  480
AKAANLKNVG NIQAAPIPLV PTCEGFDYGT GEPYDYLVDD LDGYFIT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018625367.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Refseq	XP_018625368.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Refseq	XP_018625369.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1J6K818	0.0	A0A1J6K818_NICAT; Transcription factor voz1
STRING	XP_009780205.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]