PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04922g00002.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 414aa MW: 45489.6 Da PI: 5.9917

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04922g00002.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.8	4.9e-08	91	153	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kr r NRe+Ar +R++a eeL++k++ L eN+ Lkk+ e ke++ lk+e+ Niben101Scf04922g00002.1 91 EREEKRLCRVLANRESARQTIRRRQAMYEELTRKAADLALENENLKKTKELAAKEYEPLKNEN 153 7899********************************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.1E-6	91	155	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	5.7E-7	91	153	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.461	93	156	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.72E-5	95	151	No hit	No description
CDD	cd14702	3.83E-12	96	146	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence Send to blast
MNINTKQVEE SPRPWTAEKG RVSGGGDRED EVVGCELEAA QALACLAGRS QEQPIAMPDE 60 QESELKTSPR HALNYPLVVS RRSRQNLTEE EREEKRLCRV LANRESARQT IRRRQAMYEE 120 LTRKAADLAL ENENLKKTKE LAAKEYEPLK NENTNLRIQE TDGGSKSKPV EISTTITAAT 180 PNPTTNPIPA PLFNQSLITP FFWPSIVQPF SAFLLQCGSQ HISDIASVLP SPTSGELNSI 240 NRQESSNPGN PLFVLPVPCL IPFHPQSSSP FLPWSSTLTD KHHAETSSVH QCSTSYLNTG 300 NNQAAIAAER DAPESVKAKR RDFLHEAELR FPPEGGASEG SRQPSSSHIQ LGTSEHINAS 360 DIGAISCTVG HLEDTSEKIS QECITSSSKN PVDPQAAAEA RKRRKDMHQD ACTG

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence Send to blast

MNINTKQVEE SPRPWTAEKG RVSGGGDRED EVVGCELEAA QALACLAGRS QEQPIAMPDE  60
QESELKTSPR HALNYPLVVS RRSRQNLTEE EREEKRLCRV LANRESARQT IRRRQAMYEE  120
LTRKAADLAL ENENLKKTKE LAAKEYEPLK NENTNLRIQE TDGGSKSKPV EISTTITAAT  180
PNPTTNPIPA PLFNQSLITP FFWPSIVQPF SAFLLQCGSQ HISDIASVLP SPTSGELNSI  240
NRQESSNPGN PLFVLPVPCL IPFHPQSSSP FLPWSSTLTD KHHAETSSVH QCSTSYLNTG  300
NNQAAIAAER DAPESVKAKR RDFLHEAELR FPPEGGASEG SRQPSSSHIQ LGTSEHINAS  360
DIGAISCTVG HLEDTSEKIS QECITSSSKN PVDPQAAAEA RKRRKDMHQD ACTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	400	405	RKRRKD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009798218.1	0.0	PREDICTED: uncharacterized protein LOC104244482
TrEMBL	A0A1U7Y507	0.0	A0A1U7Y507_NICSY; uncharacterized protein LOC104244482
STRING	XP_009798218.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5417	17	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	1e-22	bZIP family protein