PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf04505g07006.1
Organism
Nicotiana benthamiana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 268aa    MW: 29976.1 Da    PI: 10.6125
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf04505g07006.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.99.4e-13129177550
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeaeNkaLkkele 50 
                               k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e ++ ++++ 
  Niben101Scf04505g07006.1 129 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQEIQRARSQIT 177
                               7789***********************9644488888888887777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-10119178No hitNo description
SMARTSM003388.2E-7125178IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.025127177IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.44E-8129177No hitNo description
PfamPF001705.1E-10129177IPR004827Basic-leucine zipper domain
PROSITE patternPS000360132147IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAWILIINKD NSGAYDLGEL DQALFLYLDG QEPSSIQDQR QNSGMRPPTL NIFPSQPMHI  60
EPSSTKVNNG LVSQAASGSK KSSQPSMAKS DVVPSASGPE PPKTAKREGI RKGPTSSSEQ  120
DAPKTPDPKT LRRLAQNREA ARKSRLRKKA YVQQLESSRI RLAQLEQEIQ RARSQITSFT  180
LKDTIASDAL ACPQNMANYM GQMALAMNKL ATVEGFLRQA DNLRHQTIHR LHQILTTRQA  240
ERCFLAIGEY FHRLRALSSL WLARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019252488.11e-112PREDICTED: transcription factor TGA2.2-like
SwissprotQ52MZ22e-95TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1J6ILJ11e-110A0A1J6ILJ1_NICAT; Transcription factor tga2
STRINGXP_009602906.11e-110(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.32e-49bZIP family protein