PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Niben101Scf04395g00017.1

Organism

Nicotiana benthamiana

Taxonomic ID

4100

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 476aa MW: 52923.6 Da PI: 5.3975

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Niben101Scf04395g00017.1	genome	BTI	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	423.2	4.3e-130	196	415	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipeceg 82 pppsaflgpkc+lwdc+rpa gs+w+q dycs +ha+la neg pgt p++rp gi+lkd+llf+alsak+qgk+vgipeceg Niben101Scf04395g00017.1 196 PPPSAFLGPKCSLWDCPRPAMGSDWCQkslDYCSDYHASLAPNEGYPGTPPLVRPMGIGLKDNLLFQALSAKAQGKDVGIPECEG 280 89**********************87778************************************************** PP VOZ 83 aatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfew 167 aatakspwna+elfdl+++egetirew+ffdkprrafesgnrkqrslpdy+grgwhesrkqvm+e+gglkrsyymdpqp++++ew Niben101Scf04395g00017.1 281 AATAKSPWNAPELFDLKVVEGETIREWIFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEYGGLKRSYYMDPQPMKNLEW 365 ********************************************************************************* PP VOZ 168 hlyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 hlyeyein++da+alyrlelklvd+kks+kgkv+k+s+adlqk++grlta Niben101Scf04395g00017.1 366 HLYEYEINKYDACALYRLELKLVDGKKSPKGKVTKESVADLQKQMGRLTA 415 **********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence Send to blast
MGKGSKSGAG KSASHQLFKD KAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR 60 EWKAELNEPS PASSLQGGSR VSSDIYRLLL GEEEDDATSA LAAPKPEPDA QKNDVAAFQE 120 GFNVTPVLQE QGYQLVDQCK SMPLVVNNAG INNLGIATQQ DYNSFDLQQD FDQYFPGFDA 180 LNLCLEDVLP PVHIFPPPSA FLGPKCSLWD CPRPAMGSDW CQKSLDYCSD YHASLAPNEG 240 YPGTPPLVRP MGIGLKDNLL FQALSAKAQG KDVGIPECEG AATAKSPWNA PELFDLKVVE 300 GETIREWIFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMNEYGGLK RSYYMDPQPM 360 KNLEWHLYEY EINKYDACAL YRLELKLVDG KKSPKGKVTK ESVADLQKQM GRLTAEFQSE 420 NKRSVKGRAK ANSKDVAVNM HAVPNLIVPA SEGLDYGTGA PFPDYLVDNL GGYYVT

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence Send to blast

MGKGSKSGAG KSASHQLFKD KAKNRVDDLQ GVFTNLQSAR KESRTYDVGV LEEQVHQMLR  60
EWKAELNEPS PASSLQGGSR VSSDIYRLLL GEEEDDATSA LAAPKPEPDA QKNDVAAFQE  120
GFNVTPVLQE QGYQLVDQCK SMPLVVNNAG INNLGIATQQ DYNSFDLQQD FDQYFPGFDA  180
LNLCLEDVLP PVHIFPPPSA FLGPKCSLWD CPRPAMGSDW CQKSLDYCSD YHASLAPNEG  240
YPGTPPLVRP MGIGLKDNLL FQALSAKAQG KDVGIPECEG AATAKSPWNA PELFDLKVVE  300
GETIREWIFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMNEYGGLK RSYYMDPQPM  360
KNLEWHLYEY EINKYDACAL YRLELKLVDG KKSPKGKVTK ESVADLQKQM GRLTAEFQSE  420
NKRSVKGRAK ANSKDVAVNM HAVPNLIVPA SEGLDYGTGA PFPDYLVDNL GGYYVT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009776508.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_009776509.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491038.1	0.0	PREDICTED: transcription factor VOZ1-like
Refseq	XP_016491039.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S4BQG3	0.0	A0A1S4BQG3_TOBAC; transcription factor VOZ1-like
TrEMBL	A0A1U7WPA8	0.0	A0A1U7WPA8_NICSY; transcription factor VOZ1-like
STRING	XP_009776508.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]