PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Niben101Scf03978g09014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 159aa MW: 17705.3 Da PI: 5.3135 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 31.8 | 4.1e-10 | 109 | 156 | 2 | 49 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk 49 p frF+Ptdeel+v+yL +k+ + +l++ +i+e+ d++ + P+d+p+ Niben101Scf03978g09014.1 109 PIKFRFRPTDEELLVHYLSRKIFSMPLPAL-IIPEMlDVFGSFPSDMPE 156 677*************************95.577776*********995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF53098 | 8.34E-6 | 10 | 68 | IPR012337 | Ribonuclease H-like domain |
Pfam | PF05699 | 1.9E-8 | 21 | 70 | IPR008906 | HAT, C-terminal dimerisation domain |
SuperFamily | SSF101941 | 4.05E-12 | 104 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 16.14 | 108 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.0E-5 | 110 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MDEFDLSESQ PESSSQKTKI ELYLEYPVLA RKGNENVDVL KFWKDKMNRY HKLSVIAGDG 60 LSIPISTVVS SALEGEYGGV QAAVSQGKPT VSKEGAKPAE GTIRSLNLPI KFRFRPTDEE 120 LLVHYLSRKI FSMPLPALII PEMLDVFGSF PSDMPEKLT |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA13250 | 13 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 4e-13 | NAC domain containing protein 83 |