PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g104190.1
Common NameMTR_7g104190
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 499aa    MW: 55530.1 Da    PI: 7.8408
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g104190.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.23.1e-07146208163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      eke +r rr   NRe+Ar   +R++a  eeL +k+++L  eN+ Lk + e   ke+++l++ +
  Medtr7g104190.1 146 EKEARRIRRVLANRESARQTIRRRQALSEELSRKAATLAMENENLKRKKELALKEYQSLETTN 208
                      799*******************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512576128No hitNo description
SMARTSM003382.0E-6146210IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.599148211IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-4150206No hitNo description
SuperFamilySSF579595.42E-5150205No hitNo description
CDDcd147026.10E-13151202No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MDSQKRYAST SSSLSLSPTS SSSSSSSCPS EDPAVKTEEI EAAETLAYLA RLAMRHTAHS  60
ADKCCTQRDT CRFISDSTLP DSDPPTVRGQ AVASQQLDED ISSTTSVKTE RIQQNDCLKN  120
MKVEQDADYP KTTHSNKSRR NLTEEEKEAR RIRRVLANRE SARQTIRRRQ ALSEELSRKA  180
ATLAMENENL KRKKELALKE YQSLETTNKL LKTQIAKSIN TEVEKTPVVQ ELSMSEVSPA  240
PGTSPWFLYN HFPVRQLFWP SILPSSNQVQ LQHTPFNSIA IPSHVYVPCS SESESLHKQN  300
NLINDNQTQN PLYMFPCPWL YPPPDIASGQ PPPSCGLEDE QDNLPLREQC STTLSLNSVG  360
HGDYHATLPI KLKTEASDKT ESRSSNDLGH ATPCFSSDGG EQKPRWRTIE KFHGPAVNCN  420
GYASVVKEEP GLQLHSTSIT KVSSTASHIT ALQEKKQEQF LCPGKNLVDA VAAAEARKRR  480
KELTKLKSIQ SRQSRMEC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1476481RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g104190.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1540340.0AC154034.1 Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003625781.10.0uncharacterized protein LOC11434766 isoform X1
TrEMBLG7L6020.0G7L602_MEDTR; BZIP transcription factor
STRINGAES819990.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64002834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.12e-42bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]