PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr7g092750.3 | ||||||||
Common Name | MTR_7g092750 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | bZIP | ||||||||
Protein Properties | Length: 364aa MW: 41180.1 Da PI: 9.3094 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 73 | 102 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34 k rr+++NReAAr+sR+RKka+i++Le Medtr7g092750.3 73 KILRRLAQNREAARKSRLRKKAYIQQLESS 102 5679***********************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.4E-9 | 67 | 114 | No hit | No description |
SMART | SM00338 | 6.8E-6 | 69 | 154 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.025 | 71 | 113 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.2E-8 | 73 | 108 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-8 | 74 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 76 | 91 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.1E-29 | 163 | 237 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MRPPTLNIFP SQPMHVEPSS SNSKASMDLV SPQTSGSKKG SEPPKAVKPR EKNHGKGPTS 60 SSEHEGPKTP DPKILRRLAQ NREAARKSRL RKKAYIQQLE SSRIKLNQME QELHHARNQG 120 MFFGGGAMLG GEQGLPSMNT ISSEAAMFDV EYARWLEEHH RLVCELRAAV HEHIPENELR 180 MFVDKFLAQY DQVAQLKSLV AKADIFHLVS GMWVTPIERC FMWIGGFKPS ELIKIIVSQI 240 EPLTEQQIMG IYGLQQSTQQ GEDALSQGLE ALNQTLSETI TSDSLSYPPN MTNYMDQMAR 300 AMNKLSTLES FVREADNLRH QTIHRLNQIL TTRQAARCFL AMAEYFHRMR ALSSLWLARP 360 RQE* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Mtr.11514 | 0.0 | root| seed |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr7g092750.3 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC157891 | 1e-152 | AC157891.3 Medicago truncatula chromosome 7 clone mte1-1i2, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003625219.2 | 0.0 | bZIP transcription factor TGA10 isoform X2 | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A072U1U9 | 0.0 | A0A072U1U9_MEDTR; BZIP family transcription factor | ||||
TrEMBL | G7KUH8 | 0.0 | G7KUH8_MEDTR; BZIP family transcription factor | ||||
STRING | AES81437 | 0.0 | (Medicago truncatula) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-155 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Medtr7g092750.3 |
Entrez Gene | 11443474 |
Publications ? help Back to Top | |||
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