PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g092750.1
Common NameMTR_7g092750
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 465aa    MW: 52435.3 Da    PI: 8.1953
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g092750.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.7e-11174203534
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                      k  rr+++NReAAr+sR+RKka+i++Le  
  Medtr7g092750.1 174 KILRRLAQNREAARKSRLRKKAYIQQLESS 203
                      5679***********************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.1E-9168215No hitNo description
SMARTSM003386.8E-6170255IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.025172214IPR004827Basic-leucine zipper domain
CDDcd147081.41E-20174226No hitNo description
PfamPF001704.5E-8174209IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-7175217No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
PfamPF141444.6E-29264338IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MASSVEKPNQ TTTQLEPLPP PQHRHHQQHK PQHHHHPIHD HNQISFGMMQ SSSSPSVLGN  60
YINKDSGAYD LGELDQALFL YLNGQTDPSS VQDQKQNSTS GMRPPTLNIF PSQPMHVEPS  120
SSNSKASMDL VSPQTSGSKK GSEPPKAVKP REKNHGKGPT SSSEHEGPKT PDPKILRRLA  180
QNREAARKSR LRKKAYIQQL ESSRIKLNQM EQELHHARNQ GMFFGGGAML GGEQGLPSMN  240
TISSEAAMFD VEYARWLEEH HRLVCELRAA VHEHIPENEL RMFVDKFLAQ YDQVAQLKSL  300
VAKADIFHLV SGMWVTPIER CFMWIGGFKP SELIKIIVSQ IEPLTEQQIM GIYGLQQSTQ  360
QGEDALSQGL EALNQTLSET ITSDSLSYPP NMTNYMDQMA RAMNKLSTLE SFVREADNLR  420
HQTIHRLNQI LTTRQAARCF LAMAEYFHRM RALSSLWLAR PRQE*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.115140.0root| seed
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Specifically expressed in roots. {ECO:0000269|PubMed:12777042}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g092750.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1578911e-152AC157891.3 Medicago truncatula chromosome 7 clone mte1-1i2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003625219.20.0bZIP transcription factor TGA10 isoform X2
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLG7KUH80.0G7KUH8_MEDTR; BZIP family transcription factor
STRINGAES814370.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-167bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]