PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g073430.1
Common NameMTR_7g073430
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family WRKY
Protein Properties Length: 284aa    MW: 32483.1 Da    PI: 5.5653
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g073430.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.33.6e-24122182259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dg++WrKYGqK++  ++fpr+YYrCt++   gC++ k+v+r +edp +  +tY+g+H+++
  Medtr7g073430.1 122 EDGHQWRKYGQKKILHTDFPRNYYRCTHKndqGCKAIKQVQRIQEDPPLHRTTYSGHHTCR 182
                      7***************************99999*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-24110182IPR003657WRKY domain
PROSITE profilePS5081119.898116179IPR003657WRKY domain
SuperFamilySSF1182908.24E-23119182IPR003657WRKY domain
SMARTSM007741.3E-32121183IPR003657WRKY domain
PfamPF031069.8E-24122182IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MENENLAHGG RGKVVDELLR GRELANKLRN ILNESGDIYN NDGSTIPPFA EDLLKEVLTT  60
FTNSLLFLNN NPTSEGSDMQ LTKSEDSLES NCKSSIVKER RGCYKRRKIS QTWEKESEQP  120
EEDGHQWRKY GQKKILHTDF PRNYYRCTHK NDQGCKAIKQ VQRIQEDPPL HRTTYSGHHT  180
CRILQNPEII VDYPTDHSSM FLSFDNSFPT PAKQDCPFLS VKKEECKEEV VHPPPSSNDY  240
LSGLTFDDPE KDVTLSSTLD SHDHLGVHIS DIMYDDVLNW PLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A9e-19122182969OsWRKY45
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.80650.0root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g073430.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1467840.0AC146784.30 Medicago truncatula clone mth2-172c4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003623638.10.0probable WRKY transcription factor 70
TrEMBLG7KY680.0G7KY68_MEDTR; Putative transcription factor WRKY family
STRINGAES798560.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.19e-31WRKY DNA-binding protein 70
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]