PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g073380.1
Common NameMTR_7g073380
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family WRKY
Protein Properties Length: 295aa    MW: 33514.1 Da    PI: 5.5939
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g073380.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.89.1e-23122183159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                      ++Dg++WrKYGqK++  ++fpr+YYrCt++   gC+++k+v++ +edp + ++tY  +H+++
  Medtr7g073380.1 122 VEDGHQWRKYGQKKILHTDFPRNYYRCTHKhdqGCKATKQVQQIQEDPPLYKTTYYAHHTCR 183
                      58***************************99999*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-24110183IPR003657WRKY domain
SuperFamilySSF1182901.83E-22120183IPR003657WRKY domain
SMARTSM007745.8E-34122184IPR003657WRKY domain
PROSITE profilePS5081118.785123180IPR003657WRKY domain
PfamPF031061.2E-23123183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MKNENLAHGS GRGKVIDELR RGRELANQLK NILNESGDFD DINGSTTPFA EDLLKEVLTT  60
FTNSLLFLNN NPTSEGSDMQ LTKSEDSLES NCKSTSIVKE RRGCYKRRKV SQTWEKESDR  120
PVEDGHQWRK YGQKKILHTD FPRNYYRCTH KHDQGCKATK QVQQIQEDPP LYKTTYYAHH  180
TCRILQSSEI IMDSPCDQSS MFLSFDNSFP TPAKQDCPFL SSSYPSTSSS SVKREDCKEE  240
IVHPPPSSND YLSGLTFDDP EKDVTLSSTL DSHDHLGVNI PDIMYDDVLN WPLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-18122183869OsWRKY45
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.80650.0root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g073380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1467840.0AC146784.30 Medicago truncatula clone mth2-172c4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003623634.10.0probable WRKY transcription factor 70
TrEMBLG7KY640.0G7KY64_MEDTR; Putative transcription factor WRKY family
STRINGAES798520.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-31WRKY DNA-binding protein 70
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]