PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr6g460640.1
Common NameMTR_6g460640
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family EIL
Protein Properties Length: 663aa    MW: 75094.3 Da    PI: 9.4451
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr6g460640.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3337.72.6e-103433901351
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel+ + +kd mll+++ke++ +        +++    +s eq +rk+m+raQD iL+YMl +mevc a+Gf+Yg ip++gkp +g+s++Lr+W
  Medtr6g460640.1  43 EELEAKIYKDEMLLRKIKEERSK--------IDN---TTSLEQRKRKTMARAQDRILRYMLMMMEVCDARGFIYGVIPHEGKPISGSSENLRGW 125
                      89*************88887765........233...3578999************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wke v+fd+ngpaai+ky+a+n i + + ++   ++ + hsl+el DT lgSLLs+l+ hc ppqrrfplekg++pPWWPtGke w +e+ +s+
  Medtr6g460640.1 126 WKEIVKFDKNGPAAIAKYEAENGITTTNYEKLNGETITLHSLNELTDTILGSLLSSLVPHCHPPQRRFPLEKGIPPPWWPTGKESWRNEMRFSE 219
                      *************************99998877799********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX..XXXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss..slrkqspkvtlsc 278
                      + g ppy+kph+lkk+wkv vL+avikhmsp++ +ir+ +rqs++lqdk + ke+ ++ +++ +ee ++++++++  ss  s  ++s+ + ++ 
  Medtr6g460640.1 220 EPGLPPYRKPHNLKKVWKVYVLAAVIKHMSPNVHNIRNIVRQSRSLQDKLTMKETSIWGAIIDHEETIARKIHPEffSSfdSRVEGSNYLHVEA 313
                      ***************************************************************************9644554445777777776 PP

                      XXXXXXX.......XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXX CS
             EIN3 279 eqkedve.......gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisq 351
                      ++ + ve       ++k s  +++ + +  ++++ ++krk+k +++  ++ ++   t  +++ +  +++   +++n +++
  Medtr6g460640.1 314 NDVDVVEggehnlaKRKLSP-SSSPSSSSSSSYEGTNKRKRKLGKKIGTHHNSFLNT--HQHATPLDQHEFQKERNVRNN 390
                      65544446555543333333.444445555699999999988888877776644333..333332333333444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.4E-10143285No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-57160294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.88E-49164288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    Send to blast
MYPRVHNGAI ANHSRGEASN NAKQDKGKEK VEEDVEKKEL TIEELEAKIY KDEMLLRKIK  60
EERSKIDNTT SLEQRKRKTM ARAQDRILRY MLMMMEVCDA RGFIYGVIPH EGKPISGSSE  120
NLRGWWKEIV KFDKNGPAAI AKYEAENGIT TTNYEKLNGE TITLHSLNEL TDTILGSLLS  180
SLVPHCHPPQ RRFPLEKGIP PPWWPTGKES WRNEMRFSEE PGLPPYRKPH NLKKVWKVYV  240
LAAVIKHMSP NVHNIRNIVR QSRSLQDKLT MKETSIWGAI IDHEETIARK IHPEFFSSFD  300
SRVEGSNYLH VEANDVDVVE GGEHNLAKRK LSPSSSPSSS SSSSYEGTNK RKRKLGKKIG  360
THHNSFLNTH QHATPLDQHE FQKERNVRNN HHVTSTHIGS SSNINNNNNQ FQMVGVEVST  420
THQNVAPLAQ RVQPAVPVAN QIIHHTGNYS GRGEVDSDLM DIYNSGIQLN KNTNVMSTMI  480
PTSGVNHNVH HQIYHASAQL EKNNMSTMIP NHGINQSMHR QIYTGSVQQN KNTIMSTMVP  540
TPSVNLHPQV YTSSVHQQQK RNTMMNTSMM SNSMPVMNMV ATPGFNQNMQ HQMDQNFYAQ  600
QGGANSYYHC KVRDAEVANV PMQANVSTTS FDPTFEHLKA FNSQFDVDAY NNSVASSSYN  660
WN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-541632942133Protein ETHYLENE INSENSITIVE 3
4zds_B4e-541632942133Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378QRKRKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr6g460640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1482190.0AC148219.15 Medicago truncatula chromosome 6 clone mth2-21l10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013452426.20.0ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A072U9J00.0A0A072U9J0_MEDTR; Ethylene insensitive 3 family protein
STRINGAES758630.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-104ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]