PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr6g060600.1
Common NameMTR_6g060600
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family EIL
Protein Properties Length: 660aa    MW: 74866 Da    PI: 7.8907
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr6g060600.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3344.91.7e-105433931353
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      eel+ + +kd mll+++ke++ +        +++    +s eq +rk+m+raQD iL+YMl +mevc a+Gf+Yg ip++gkp +g+s++Lr+W
  Medtr6g060600.1  43 EELEAKIYKDEMLLRKIKEERSK--------IDN---TTSLEQRKRKTMARAQDRILRYMLMMMEVCDARGFIYGVIPHEGKPISGSSENLRGW 125
                      89*************88887765........233...3578999************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wk+ v+fd+ngpaai+ky+a+n i + + ++   ++ + hsl+el+DT lgSLLs+l+ hc ppqrrfplekg++pPWWPtGke w +e+ +s+
  Medtr6g060600.1 126 WKDIVKFDKNGPAAIAKYEAENGITTTNYEKLNGETITLHSLNELPDTILGSLLSSLVPHCHPPQRRFPLEKGIPPPWWPTGKESWRNEMRFSE 219
                      *************************99998877799********************************************************** PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX..XXXXXXXXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss..slrkqspkvtlsc 278
                      + g ppy+kph+lkk+wkv vL+avikhmsp++ +ir+ +rqs++lqdk + ke+ ++ +++ +ee ++++++++  ss  s+ ++s+ + ++ 
  Medtr6g060600.1 220 EPGLPPYRKPHNLKKVWKVYVLAAVIKHMSPNVHNIRNIVRQSRSLQDKLTMKETSIWGEIIDHEETIARKIHPEffSSfdSHVEGSNYLLVEA 313
                      ***************************************************************************9755667777888888888 PP

                      XXXXXXX......XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
             EIN3 279 eqkedve......gkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                      ++ + ve       k++ + +++ + +  ++++ ++krk+k +++ +++ ++   ++++ + +  + e+  ++kn +++++
  Medtr6g060600.1 314 NDVDVVEggehnlAKRKLSSSSSPSSSSSSSYEGTNKRKRKLGKRISTHHNSF-LNTHQHATPLDQHEFSQQEKNVRNNHH 393
                      75555557666653333333445555556699*******99999999988865.777888888899*********999985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.0E-10043285No hitNo description
Gene3DG3DSA:1.10.3180.103.0E-57160294IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.49E-49164288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MYHKVHNGAI ANHSRGEASN NAKQDKGKEK VEEDVEKKEL TIEELEAKIY KDEMLLRKIK  60
EERSKIDNTT SLEQRKRKTM ARAQDRILRY MLMMMEVCDA RGFIYGVIPH EGKPISGSSE  120
NLRGWWKDIV KFDKNGPAAI AKYEAENGIT TTNYEKLNGE TITLHSLNEL PDTILGSLLS  180
SLVPHCHPPQ RRFPLEKGIP PPWWPTGKES WRNEMRFSEE PGLPPYRKPH NLKKVWKVYV  240
LAAVIKHMSP NVHNIRNIVR QSRSLQDKLT MKETSIWGEI IDHEETIARK IHPEFFSSFD  300
SHVEGSNYLL VEANDVDVVE GGEHNLAKRK LSSSSSPSSS SSSSYEGTNK RKRKLGKRIS  360
THHNSFLNTH QHATPLDQHE FSQQEKNVRN NHHFTSTEIG SSNNQFEMVE VEVSTTHQNV  420
APLAQRLQAA VPVADQIIHH TGNYSGGGEV DSDLMDIYNS CIQLNKNTVM STMIPTPGYN  480
HNMHHQIYNA SVQHAKNNMS TMIPNQGVNQ SMQHQIYTGS VQQNKNTIMS TMVPTPGVNQ  540
NLHPQVYTSS VHQQQKSNTM MNTTMMSTPM PVMNMVATPG FNQNMQHQMD QNFYAQQGGP  600
NSYYHCKVPN TEVANVPMQA NASRETFDPS FDHLKAFNCQ SDVDAYNNYV ASSSYNWNQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-521632942133Protein ETHYLENE INSENSITIVE 3
4zds_B1e-521632942133Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17378QRKRKT
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr6g060600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1482190.0AC148219.15 Medicago truncatula chromosome 6 clone mth2-21l10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003619645.20.0ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLG7KNC00.0G7KNC0_MEDTR; Ethylene insensitive 3 family protein
STRINGAES758630.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-104ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]