PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr4g079240.1
Common NameMTR_4g079240
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family VOZ
Protein Properties Length: 505aa    MW: 56628.3 Da    PI: 6.0997
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr4g079240.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ370.26.8e-1142434771217
              VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaae 94 
                      pppsafl+pkcalwdc+rpaqg e++qdycss h+ la  e+  g tp+lrp+gid+kdg+lfaa+ ak+ gkevgip+cegaa+ak+pwna+e
  Medtr4g079240.1 243 PPPSAFLAPKCALWDCFRPAQGLEQCQDYCSSNHELLAKSED-EGKTPILRPGGIDVKDGPLFAAVLAKTLGKEVGIPKCEGAASAKAPWNASE 335
                      89************************************9887.69************************************************* PP

              VOZ  95 lfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineld.......... 178
                      lfd+slleget+rewlffdkprraf+sg+rkqr +pdy grgwhesrkqvmke+gg+krsyymdpqp ++ ewhlyeyein+ +          
  Medtr4g079240.1 336 LFDISLLEGETVREWLFFDKPRRAFDSGSRKQRNIPDYCGRGWHESRKQVMKEHGGQKRSYYMDPQPVDYVEWHLYEYEINNHEgclpeknnhn 429
                      ********************************************************************************98652222222222 PP

              VOZ 179 a.........lalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                                +alyrlelk vd+kks+k kv+k+sladlq+k+g+lta
  Medtr4g079240.1 430 GclstkinhgCALYRLELKRVDKKKSPKVKVTKESLADLQNKMGKLTA 477
                      02223333338***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MMKENSGGKY GSSSQKSMKE KERHMVNKIQ GIFTNLQSAR KESRATDILI IEEQMHQLLR  60
EWKAELESPA TSLNDGSLGS FPGELAQLLQ GFEEKDDAIS PLTKPGMFNT DYHQNNINDS  120
NYEFYQEKCF DNNQSLGHTF EGSASTPFSS PLNSSGMAQL DFHSFGLNQD MDHNAVGHSS  180
DLIGRHKFCQ DHILGYNTEV KNSESAQFNL EEGFDEYDQL FGDNYTKNFG DNFIPNILPN  240
IRPPPSAFLA PKCALWDCFR PAQGLEQCQD YCSSNHELLA KSEDEGKTPI LRPGGIDVKD  300
GPLFAAVLAK TLGKEVGIPK CEGAASAKAP WNASELFDIS LLEGETVREW LFFDKPRRAF  360
DSGSRKQRNI PDYCGRGWHE SRKQVMKEHG GQKRSYYMDP QPVDYVEWHL YEYEINNHEG  420
CLPEKNNHNG CLSTKINHGC ALYRLELKRV DKKKSPKVKV TKESLADLQN KMGKLTAAAP  480
SPDDGKSVKG KTEAKSQNIG LPEY*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.71220.0leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr4g079240.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1716180.0AC171618.20 Medicago truncatula clone mth2-144n17, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003607530.20.0transcription factor VOZ1
RefseqXP_024638008.10.0transcription factor VOZ1
TrEMBLG7JUY70.0G7JUY7_MEDTR; Putative transcription factor VOZ family
STRINGAES897270.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-118vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]