PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr2g098470.1
Common NameMTR_2g098470
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family EIL
Protein Properties Length: 620aa    MW: 69263.7 Da    PI: 6.4791
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr2g098470.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3433.42.2e-132384091351
                      XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
             EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                      e+l++rmwkd+++lkrlke++k   e+++a ++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g+sd++raW
  Medtr2g098470.1  38 EDLERRMWKDRIKLKRLKEKQKL--EAQKA-LEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAW 128
                      89***************999986..44555.9************************************************************** PP

                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS
             EIN3  95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188
                      Wkekv+fdrngpaai+ky+a++l++s+++++  ++ +++++l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww++l l++
  Medtr2g098470.1 129 WKEKVKFDRNGPAAIAKYEAECLAMSEAENN--RNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSHLNLPH 220
                      **************************99988..689999******************************************************* PP

                      T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..........XXXXXXX CS
             EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..........slrkqsp 272
                       q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes ++l vl++ee+++++ s+++            l  + +
  Medtr2g098470.1 221 GQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRKHVRQSKCLQDKMTAKESSIWLGVLSREEALIRQPSSDNGtsgitdmptgVLLLEYK 313
                      **9.9**********************************************************************4445688777774444778 PP

                      XXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXX CS
             EIN3 273 kvtlsceqkedvegkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsi 349
                      +  +s+ +++dv+g++e   + ++++++ +                 + +  +k+ ++++ ++  s+ ++      +++ + e++  ++++n++
  Medtr2g098470.1 314 QPAASSASNYDVDGTDEGVGSVSSKEDRSNqfmdtepsdnsrrnsvqDSDRPKKKPRPKRPRSRPSAADTLPAQSDNEILHVEPRSKLPNMNER 407
                      888899999****888888787777777776777777777777777544444444433333333333344455555666677777777777777 PP

                      XX CS
             EIN3 350 sq 351
                      ++
  Medtr2g098470.1 408 DE 409
                      65 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.6E-12738285No hitNo description
Gene3DG3DSA:1.10.3180.109.1E-72159293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.28E-62166289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MGELVEIGAE IGSDLDVDDI RYHNIPEKDV SDEEIEAEDL ERRMWKDRIK LKRLKEKQKL  60
EAQKALEKQK PRQSSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
SSDNIRAWWK EKVKFDRNGP AAIAKYEAEC LAMSEAENNR NGNSQSTLQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGNE DWWSHLNLPH GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKIRKHVR QSKCLQDKMT AKESSIWLGV LSREEALIRQ PSSDNGTSGI  300
TDMPTGVLLL EYKQPAASSA SNYDVDGTDE GVGSVSSKED RSNQFMDTEP SDNSRRNSVQ  360
DSDRPKKKPR PKRPRSRPSA ADTLPAQSDN EILHVEPRSK LPNMNERDET HVAALQIHGN  420
EQVNGTESVL RPPEIRHEGP SHLSGHEVPV HLSGHEVAVH VPAPGFDHYS YMHANSIISS  480
QSAYMSRRPP LHYSQLQNPD MPHEAAYNLY NSVTGYGPSR DGQHQQLQPG PAANSEPIRQ  540
PENAAITMPA ANVNGDEIIG GGMNYIAKDT FPNELDRFGS PLSNMSFDFG VLDNPPSPPF  600
LLDDFMGLGD DEMMQYFGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-721652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1363369RPKKKPR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.79160.0leaf| pod| root| stem
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr2g098470.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1967640.0AC196764.3 Medicago truncatula chromosome 2 BAC clone mte1-58o13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003597476.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLG7IUG20.0G7IUG2_MEDTR; Ethylene insensitive transcription factor
STRINGAES677270.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-174ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  2. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  3. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  4. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  5. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]