PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr1g024420.1 | ||||||||
Common Name | MTR_1g024420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | EIL | ||||||||
Protein Properties | Length: 117aa MW: 13585.8 Da PI: 9.5971 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 91.4 | 2.1e-28 | 10 | 109 | 1 | 103 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 eel+ r d+mllk++ke++ + d+ ++++++k k+ +a+ + s+ + +YM+k+mevc a+Gf+Yg ip++gkp++g+s++Lr+W Medtr1g024420.1 10 EELEARICNDKMLLKKMKEERSK--RDNTTSLEQRK-TKTMARAQERSNSQLTHNVNRYMIKMMEVCDARGFIYGVIPHEGKPMSGSSENLRGW 100 8**************99988887..45666566655.4555566666666666778************************************** PP XXXXXXXXX CS EIN3 95 Wkekvefdr 103 Wk+ v+f+ Medtr1g024420.1 101 WKDIVKFEG 109 ******975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 1.1E-30 | 10 | 108 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence Send to blast |
MVIKKELTIE ELEARICNDK MLLKKMKEER SKRDNTTSLE QRKTKTMARA QERSNSQLTH 60 NVNRYMIKMM EVCDARGFIY GVIPHEGKPM SGSSENLRGW WKDIVKFEGG EMECKV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr1g024420.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC144619 | 1e-103 | AC144619.3 Medicago truncatula clone mth2-8n3, complete sequence. | |||
GenBank | AC225462 | 1e-103 | AC225462.6 Medicago truncatula clone mth2-16o15, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024630853.1 | 8e-48 | uncharacterized protein LOC112418638 | ||||
TrEMBL | G7I732 | 2e-80 | G7I732_MEDTR; Ethylene insensitive protein | ||||
STRING | AES59695 | 4e-81 | (Medicago truncatula) | ||||
STRING | AES61950 | 4e-81 | (Medicago truncatula) | ||||
STRING | AES61967 | 4e-81 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 1e-28 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Medtr1g024420.1 |
Entrez Gene | 11416393 |
Publications ? help Back to Top | |||
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