PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr1g017570.1 | ||||||||
Common Name | MTR_1g017570 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | bZIP | ||||||||
Protein Properties | Length: 146aa MW: 17132.4 Da PI: 9.579 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.4e-11 | 60 | 107 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++ rr+q+NRe+ArrsR RKk +e+L++ L eN++Lk++l Medtr1g017570.1 60 RKIRRMQSNRESARRSRWRKKRHVENLTNDLNRLRMENRELKNQLGLT 107 6789**************************************888665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-10 | 56 | 120 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.231 | 58 | 104 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.7E-8 | 60 | 105 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.59E-12 | 60 | 114 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-8 | 60 | 108 | No hit | No description |
CDD | cd14702 | 2.40E-13 | 61 | 109 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MSFHEEEYPV RFTCVPVHET MFTQGEIEEL FSLINQPVDP SSPGSGSQGS NRAVYSTRER 60 KIRRMQSNRE SARRSRWRKK RHVENLTNDL NRLRMENREL KNQLGLTMQY NLILSTENER 120 LRLESMSLLA TLLDLYRTLE TIISQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr1g017570.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004498959.1 | 4e-87 | basic leucine zipper 4 | ||||
TrEMBL | A0A072VDB1 | 1e-101 | A0A072VDB1_MEDTR; Basic leucine zipper transcription factor | ||||
STRING | XP_004498959.1 | 2e-86 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-17 | basic leucine-zipper 5 |
Link Out ? help Back to Top | |
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Phytozome | Medtr1g017570.1 |
Entrez Gene | 25482049 |
Publications ? help Back to Top | |||
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