PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Medtr1g015990.1 | ||||||||
Common Name | MTR_1g015990 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
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Family | EIL | ||||||||
Protein Properties | Length: 193aa MW: 22131.8 Da PI: 10.0367 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 22.9 | 1.3e-07 | 42 | 93 | 159 | 233 |
TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSS CS EIN3 159 qrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqsky 233 q r+ e+g+ pPWWP+Gk+ ++ kv vL+ vikhms +i++ir+++ + + Medtr1g015990.1 42 QMRYLIERGIHPPWWPSGKKNMVC-----------------------KVYVLAGVIKHMSLDIKKIRRHVFDNIC 93 678999**************9999.......................6889******************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.3180.10 | 4.5E-4 | 41 | 61 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.75E-11 | 42 | 91 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-4 | 65 | 94 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MVAKSITADK ILHDYEGKPM IDSSNNLRGC WKDKVKFDKM VQMRYLIERG IHPPWWPSGK 60 KNMVCKVYVL AGVIKHMSLD IKKIRRHVFD NICGGTRSSL NSISFHHNSF PDGYHGGGMP 120 ISKDISFVVD HNVAFMMIKV NLMLCQRTTK RMEQFVNETY IIIKVNKDII GDTPAAFTTN 180 KEEREARWVE AR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Medtr1g015990.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC152920 | 5e-84 | AC152920.17 Medicago truncatula clone mth2-101o15, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | G7I9X0 | 1e-142 | G7I9X0_MEDTR; Ethylene insensitive protein | ||||
STRING | AES59231 | 1e-143 | (Medicago truncatula) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73730.1 | 2e-10 | ETHYLENE-INSENSITIVE3-like 3 |
Link Out ? help Back to Top | |
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Phytozome | Medtr1g015990.1 |
Entrez Gene | 11418138 |
Publications ? help Back to Top | |||
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